RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 SEC14L1Q92503 715 aa5.65□□□□□ -1.5
CHD8-212ENST00000557329 UBXN4Q92575 508 aa5.65□□□□□ -1.5
CHD8-212ENST00000557329 MTA3Q9BTC8 594 aa5.65□□□□□ -1.5
CHD8-212ENST00000557329 SPATA9Q9BWV2 254 aa5.65□□□□□ -1.5
CHD8-212ENST00000557329 GPRC5CQ9NQ84 441 aa5.65□□□□□ -1.5
CHD8-212ENST00000557329 CFDP1Q9UEE9 299 aaPredicted RBP5.65□□□□□ -1.5
CHD8-212ENST00000557329 MBD1Q9UIS9 605 aaPredicted RBP5.65□□□□□ -1.5
CHD8-212ENST00000557329 CNOT6Q9ULM6 557 aaKnown RBP5.65□□□□□ -1.5
CHD8-212ENST00000557329 SMG5Q9UPR3 1016 aaKnown RBP5.65□□□□□ -1.5
CHD8-212ENST00000557329 NPFFR2Q9Y5X5 522 aa5.65□□□□□ -1.5
CHD8-212ENST00000557329 RNF17Q9BXT8 1623 aaKnown RBP5.65□□□□□ -1.51
CHD8-212ENST00000557329 ZNF142P52746 1687 aaPredicted RBP5.65□□□□□ -1.51
CHD8-212ENST00000557329 A2MP01023 1474 aa5.64□□□□□ -1.51
CHD8-212ENST00000557329 UGGT1Q9NYU2 1555 aa5.64□□□□□ -1.51
CHD8-212ENST00000557329 REREQ9P2R6 1566 aa5.64□□□□□ -1.51
CHD8-212ENST00000557329 C1QTNF9P0C862 333 aa5.64□□□□□ -1.51
CHD8-212ENST00000557329 NSMFQ6X4W1 530 aa5.64□□□□□ -1.51
CHD8-212ENST00000557329 KREMEN2Q8NCW0 462 aa5.64□□□□□ -1.51
CHD8-212ENST00000557329 TRMT2BQ96GJ1 504 aaKnown RBP5.64□□□□□ -1.51
CHD8-212ENST00000557329 TMEM169Q96HH4 297 aa5.64□□□□□ -1.51
CHD8-212ENST00000557329 X6R8D5 127 aa5.64□□□□□ -1.51
CHD8-212ENST00000557329 AFF2P51816 1311 aa5.64□□□□□ -1.51
CHD8-212ENST00000557329 IRS2Q9Y4H2 1338 aa5.64□□□□□ -1.51
CHD8-212ENST00000557329 KIDINS220Q9ULH0 1771 aa5.64□□□□□ -1.51
CHD8-212ENST00000557329 TROQ12816 1431 aaPredicted RBP5.64□□□□□ -1.51
CHD8-212ENST00000557329 FAM135BQ49AJ0 1406 aa5.64□□□□□ -1.51
CHD8-212ENST00000557329 NEURL4Q96JN8 1562 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 EFEMP2O95967 443 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 MSL3P1P0C860 447 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 SERINC3Q13530 473 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 CYP4F22Q6NT55 531 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 AMIGO3Q86WK7 504 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 LDHDQ86WU2 507 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 TMEM145Q8NBT3 493 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 CPA5Q8WXQ8 436 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 CDC6Q99741 560 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 IER2Q9BTL4 223 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 KRTAP9-3Q9BYQ3 159 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 CNTD2Q9H8S5 307 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 GULP1Q9UBP9 304 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 RWDD3Q9Y3V2 267 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 TMEM94Q12767 1356 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 IQGAP1P46940 1657 aa5.63□□□□□ -1.51
CHD8-212ENST00000557329 CDC42BPBQ9Y5S2 1711 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 C22orf46C9J442 243 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 AQP7O14520 342 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 DGKIO75912 1065 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 FUCA1P04066 466 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 KRT1P04264 644 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 PABPC1P11940 636 aaKnown RBP5.62□□□□□ -1.51
CHD8-212ENST00000557329 GALK1P51570 392 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 LINC00310P59036 64 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 SUMO1P63165 101 aaKnown RBP5.62□□□□□ -1.51
CHD8-212ENST00000557329 SSRP1Q08945 709 aaKnown RBP5.62□□□□□ -1.51
CHD8-212ENST00000557329 CEP68Q76N32 757 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 MAMDC2Q7Z304 686 aaPredicted RBP5.62□□□□□ -1.51
CHD8-212ENST00000557329 IFNL3Q8IZI9 196 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 ZBTB38Q8NAP3 1195 aaPredicted RBP5.62□□□□□ -1.51
CHD8-212ENST00000557329 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.62□□□□□ -1.51
CHD8-212ENST00000557329 PHOSPHO1Q8TCT1 267 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 PLEKHO2Q8TD55 490 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 PANK1Q8TE04 598 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 DEPDC7Q96QD5 511 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 EPB41L1Q9H4G0 881 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 GCM1Q9NP62 436 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 MARCH2Q9P0N8 246 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 FAN1Q9Y2M0 1017 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 MSH6P52701 1360 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 MIA2Q96PC5 1412 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 ROBO1Q9Y6N7 1651 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 PHLPP1O60346 1717 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 STRCP1A6NGW2 1772 aa5.62□□□□□ -1.51
CHD8-212ENST00000557329 NPIPB6E9PJ23 425 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 KRIT1O00522 736 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 IRS4O14654 1257 aaPredicted RBP5.61□□□□□ -1.51
CHD8-212ENST00000557329 PRODHO43272 600 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 DLX3O60479 287 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 TACR1P25103 407 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 YY1P25490 414 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 RBM6P78332 1123 aaKnown RBP5.61□□□□□ -1.51
CHD8-212ENST00000557329 PRR5P85299 388 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 KIZQ2M2Z5 673 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 SPATA31A6Q5VVP1 1343 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 TCERG1LQ5VWI1 586 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 STYK1Q6J9G0 422 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 SAMD9LQ8IVG5 1584 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 ALG3Q92685 438 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 C1orf159Q96HA4 380 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 CHAMP1Q96JM3 812 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 SRPK1Q96SB4 655 aaKnown RBP5.61□□□□□ -1.51
CHD8-212ENST00000557329 KCTD3Q9Y597 815 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 PCDHA5Q9Y5H7 936 aa5.61□□□□□ -1.51
CHD8-212ENST00000557329 CFAP65Q6ZU64 1925 aaKnown RBP5.6□□□□□ -1.51
CHD8-212ENST00000557329 SYCP2Q9BX26 1530 aa5.6□□□□□ -1.51
CHD8-212ENST00000557329 FMN1Q68DA7 1419 aa5.6□□□□□ -1.51
CHD8-212ENST00000557329 ZC3H12DA2A288 527 aaKnown RBP5.6□□□□□ -1.51
CHD8-212ENST00000557329 TBX1O43435 398 aa5.6□□□□□ -1.51
CHD8-212ENST00000557329 NUAK1O60285 661 aa5.6□□□□□ -1.51
CHD8-212ENST00000557329 KCNA6P17658 529 aa5.6□□□□□ -1.51
CHD8-212ENST00000557329 ATF3P18847 181 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms