RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 SUPT20HL2P0C7V6 817 aa12.17□□□□□ -0.46
LINC00239-201ENST00000556973 ARP10275 920 aa12.17□□□□□ -0.46
LINC00239-201ENST00000556973 MCM2P49736 904 aa12.17□□□□□ -0.46
LINC00239-201ENST00000556973 CCDC83Q8IWF9 413 aa12.17□□□□□ -0.46
LINC00239-201ENST00000556973 RASGRP4Q8TDF6 673 aa12.17□□□□□ -0.46
LINC00239-201ENST00000556973 KAT2BQ92831 832 aa12.17□□□□□ -0.46
LINC00239-201ENST00000556973 GPR20Q99678 358 aa12.17□□□□□ -0.46
LINC00239-201ENST00000556973 LBHD1Q9BQE6 289 aaPredicted RBP12.17□□□□□ -0.46
LINC00239-201ENST00000556973 PRDM5Q9NQX1 630 aaPredicted RBP12.17□□□□□ -0.46
LINC00239-201ENST00000556973 PDLIM7Q9NR12 457 aa12.17□□□□□ -0.46
LINC00239-201ENST00000556973 KCNJ14Q9UNX9 436 aa12.17□□□□□ -0.46
LINC00239-201ENST00000556973 SCN10AQ9Y5Y9 1956 aa12.17□□□□□ -0.46
LINC00239-201ENST00000556973 PDE4DIPQ5VU43 2346 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 IGLV3-22A0A075B6J6 115 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 TRIM43BA6NCK2 446 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 FAM86B1E9PN63 330 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 DTNBO60941 627 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 FAM86B2P0C5J1 330 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 CIITAP33076 1130 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 BMP8BP34820 402 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 ST3GAL1Q11201 340 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 TRIM29Q14134 588 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 NPY5RQ15761 445 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 FAM47CQ5HY64 1035 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 SH3RF1Q7Z6J0 888 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 PLA2G4DQ86XP0 818 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 TBCKQ8TEA7 893 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 SEPT1Q8WYJ6 367 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 TRIM43Q96BQ3 446 aaPredicted RBP12.16□□□□□ -0.46
LINC00239-201ENST00000556973 SDF4Q9BRK5 362 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 C16orf70Q9BSU1 422 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 AGO4Q9HCK5 861 aaKnown RBP12.16□□□□□ -0.46
LINC00239-201ENST00000556973 COLQQ9Y215 455 aaPredicted RBP12.16□□□□□ -0.46
LINC00239-201ENST00000556973 DNAH12Q6ZR08 3092 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 LTBP2Q14767 1821 aa12.16□□□□□ -0.46
LINC00239-201ENST00000556973 H3BRB1 525 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 HAS3O00219 553 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 B4GALT4O60513 344 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 JAK2O60674 1132 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 F2P00734 622 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 TIMP1P01033 207 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 RAG1P15918 1043 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 PSEN2P49810 448 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 CHMP4BP1P59074 171 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 HMGN5P82970 282 aaKnown RBP12.15□□□□□ -0.46
LINC00239-201ENST00000556973 SETQ01105 290 aaPredicted RBP12.15□□□□□ -0.46
LINC00239-201ENST00000556973 MFSD10Q14728 455 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 NONOQ15233 471 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC00239-201ENST00000556973 KIAA0753Q2KHM9 967 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 CHRDL2Q6WN34 429 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 KRT25Q7Z3Z0 450 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 SESTD1Q86VW0 696 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 C7orf31Q8N865 590 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 GDF15Q99988 308 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 TUT1Q9H6E5 874 aaKnown RBP12.15□□□□□ -0.46
LINC00239-201ENST00000556973 GJB4Q9NTQ9 266 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 TBC1D22BQ9NU19 505 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 PKD2L1Q9P0L9 805 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 SLC9A2Q9UBY0 812 aa12.15□□□□□ -0.46
LINC00239-201ENST00000556973 CYP3A7-CYP3A51PA0A087WV96 503 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 CCDC194A0A1B0GVG4 234 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 GSTTP1A0A1W2PQM5 241 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 IPO5O00410 1097 aaKnown RBP12.14□□□□□ -0.47
LINC00239-201ENST00000556973 EDIL3O43854 480 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 MMP1P03956 469 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 LGALS2P05162 132 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 ZNF286BP0CG31 522 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 CYP3A7P24462 503 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 KRT2P35908 639 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 TCF7P36402 384 aaPredicted RBP12.14□□□□□ -0.47
LINC00239-201ENST00000556973 MAGEA10P43363 369 aaPredicted RBP12.14□□□□□ -0.47
LINC00239-201ENST00000556973 MDM2Q00987 491 aaPredicted RBP12.14□□□□□ -0.47
LINC00239-201ENST00000556973 PRR16Q569H4 304 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 FAM184AQ8NB25 1140 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 BADQ92934 168 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 ZNF577Q9BSK1 485 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 TRPV6Q9H1D0 765 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 PRO3102Q9H379 93 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 BRMS1Q9HCU9 246 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 JPH1Q9HDC5 661 aaPredicted RBP12.14□□□□□ -0.47
LINC00239-201ENST00000556973 TBX21Q9UL17 535 aa12.14□□□□□ -0.47
LINC00239-201ENST00000556973 A0A1W2PPC1 479 aa12.13□□□□□ -0.47
LINC00239-201ENST00000556973 ATG7O95352 703 aa12.13□□□□□ -0.47
LINC00239-201ENST00000556973 ITGB8P26012 769 aa12.13□□□□□ -0.47
LINC00239-201ENST00000556973 SP4Q02446 784 aa12.13□□□□□ -0.47
LINC00239-201ENST00000556973 ITGB3BPQ13352 177 aaPredicted RBP12.13□□□□□ -0.47
LINC00239-201ENST00000556973 Q4G0T1 1027 aa12.13□□□□□ -0.47
LINC00239-201ENST00000556973 UTP14CQ5TAP6 766 aaKnown RBP12.13□□□□□ -0.47
LINC00239-201ENST00000556973 KRT40Q6A162 431 aa12.13□□□□□ -0.47
LINC00239-201ENST00000556973 MOXD1Q6UVY6 613 aa12.13□□□□□ -0.47
LINC00239-201ENST00000556973 TMX3Q96JJ7 454 aa12.13□□□□□ -0.47
LINC00239-201ENST00000556973 NAP1L4Q99733 375 aaKnown RBP12.13□□□□□ -0.47
LINC00239-201ENST00000556973 UBE2OQ9C0C9 1292 aaKnown RBP12.13□□□□□ -0.47
LINC00239-201ENST00000556973 SMARCAD1Q9H4L7 1026 aa12.13□□□□□ -0.47
LINC00239-201ENST00000556973 TRMT13Q9NUP7 481 aaKnown RBP12.13□□□□□ -0.47
LINC00239-201ENST00000556973 HDAC6Q9UBN7 1215 aa12.13□□□□□ -0.47
LINC00239-201ENST00000556973 GTF2IRD1Q9UHL9 959 aa12.13□□□□□ -0.47
LINC00239-201ENST00000556973 ZNF215Q9UL58 517 aaPredicted RBP12.13□□□□□ -0.47
LINC00239-201ENST00000556973 NOD1Q9Y239 953 aa12.13□□□□□ -0.47
LINC00239-201ENST00000556973 TELO2Q9Y4R8 837 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms