RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 FDX1P10109 184 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 EEF2P13639 858 aaKnown RBP6.91□□□□□ -1.3
ATXN3-245ENST00000556958 AOC1P19801 751 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 CHMP4BP1P59074 171 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 LMNB2Q03252 620 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 NAALADL2Q58DX5 795 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 CCDC158Q5M9N0 1113 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 KCTD17Q8N5Z5 321 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 FLCNQ8NFG4 579 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 DBF4BQ8NFT6 615 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 OR6J1Q8NGC5 347 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 SUSD6Q92537 303 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 SECISBP2LQ93073 1101 aaKnown RBP6.91□□□□□ -1.3
ATXN3-245ENST00000556958 SPSB2Q99619 263 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 PLVAPQ9BX97 442 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 ACAD9Q9H845 621 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 RAVER2Q9HCJ3 691 aaKnown RBP6.91□□□□□ -1.3
ATXN3-245ENST00000556958 MCM9Q9NXL9 1143 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 DAXXQ9UER7 740 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-245ENST00000556958 PA2G4Q9UQ80 394 aaKnown RBP6.91□□□□□ -1.3
ATXN3-245ENST00000556958 FCF1Q9Y324 198 aaKnown RBP6.91□□□□□ -1.3
ATXN3-245ENST00000556958 SPTBN2O15020 2390 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 FANCIQ9NVI1 1328 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 SMCHD1A6NHR9 2005 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 DCDC2BA2VCK2 349 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 A6NJR5 290 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 BRD1O95696 1058 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 SRGAP2BP0DMP2 458 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 MS4A1P11836 297 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 NRIP1P48552 1158 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 GSK3AP49840 483 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 PTK7Q13308 1070 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 TKFCQ3LXA3 575 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 TTC39AQ5SRH9 613 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 SESTD1Q86VW0 696 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 FBXO16Q8IX29 292 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-245ENST00000556958 DCLK2Q8N568 766 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 MIGA1Q8NAN2 632 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 SEPT8Q92599 483 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 IRF7Q92985 503 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 DDRGK1Q96HY6 314 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 NEK1Q96PY6 1258 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 IFIH1Q9BYX4 1025 aaKnown RBP6.9□□□□□ -1.3
ATXN3-245ENST00000556958 TMEM134Q9H6X4 195 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 SLC38A10Q9HBR0 1119 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 SNRKQ9NRH2 765 aa6.9□□□□□ -1.3
ATXN3-245ENST00000556958 USP24Q9UPU5 2620 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 LOC102724159A0A0B4J2E5 919 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 E9PSI1 815 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 IDH1O75874 414 aaKnown RBP6.89□□□□□ -1.31
ATXN3-245ENST00000556958 CYP2E1P05181 493 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-245ENST00000556958 AKR1B1P15121 316 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 PTGS1P23219 599 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 PWP2Q15269 919 aaKnown RBP6.89□□□□□ -1.31
ATXN3-245ENST00000556958 TCTN1Q2MV58 587 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 GDF6Q6KF10 455 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-245ENST00000556958 WDR63Q8IWG1 891 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 C7orf31Q8N865 590 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 DHX38Q92620 1227 aaKnown RBP6.89□□□□□ -1.31
ATXN3-245ENST00000556958 P2RX5Q93086 422 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 CDCA3Q99618 268 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-245ENST00000556958 CRNKL1Q9BZJ0 848 aaKnown RBP6.89□□□□□ -1.31
ATXN3-245ENST00000556958 TLE6Q9H808 572 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 A1CFQ9NQ94 594 aaKnown RBP6.89□□□□□ -1.31
ATXN3-245ENST00000556958 HOMER2Q9NSB8 354 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 NCDNQ9UBB6 729 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 ADD3Q9UEY8 706 aaKnown RBP6.89□□□□□ -1.31
ATXN3-245ENST00000556958 FEM1BQ9UK73 627 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 ANGPTL2Q9UKU9 493 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 BARX2Q9UMQ3 279 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-245ENST00000556958 PLAGL2Q9UPG8 496 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 R4GN57 208 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 PTPRCP08575 1304 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 MAP1BP46821 2468 aaKnown RBP6.89□□□□□ -1.31
ATXN3-245ENST00000556958 SETXQ7Z333 2677 aaKnown RBP6.89□□□□□ -1.31
ATXN3-245ENST00000556958 DNAH14Q0VDD8 3507 aa6.89□□□□□ -1.31
ATXN3-245ENST00000556958 RBM47A0AV96 593 aaKnown RBP6.88□□□□□ -1.31
ATXN3-245ENST00000556958 RSPH10B2B2RC85 870 aa6.88□□□□□ -1.31
ATXN3-245ENST00000556958 J3QL48 77 aa6.88□□□□□ -1.31
ATXN3-245ENST00000556958 PI15O43692 258 aa6.88□□□□□ -1.31
ATXN3-245ENST00000556958 KINO60870 393 aaKnown RBP6.88□□□□□ -1.31
ATXN3-245ENST00000556958 RSPH10BP0C881 870 aa6.88□□□□□ -1.31
ATXN3-245ENST00000556958 PDE4BQ07343 736 aa6.88□□□□□ -1.31
ATXN3-245ENST00000556958 PPP2R5BQ15173 497 aa6.88□□□□□ -1.31
ATXN3-245ENST00000556958 TMEM63BQ5T3F8 832 aa6.88□□□□□ -1.31
ATXN3-245ENST00000556958 ZNF618Q5T7W0 954 aa6.88□□□□□ -1.31
ATXN3-245ENST00000556958 RBM23Q86U06 439 aaKnown RBP6.88□□□□□ -1.31
ATXN3-245ENST00000556958 AMOTL1Q8IY63 956 aa6.88□□□□□ -1.31
ATXN3-245ENST00000556958 LRRC47Q8N1G4 583 aaKnown RBP6.88□□□□□ -1.31
ATXN3-245ENST00000556958 SNIP1Q8TAD8 396 aaKnown RBP6.88□□□□□ -1.31
ATXN3-245ENST00000556958 MICAL1Q8TDZ2 1067 aa6.88□□□□□ -1.31
ATXN3-245ENST00000556958 MORC4Q8TE76 937 aa6.88□□□□□ -1.31
ATXN3-245ENST00000556958 PPP1R13LQ8WUF5 828 aa6.88□□□□□ -1.31
ATXN3-245ENST00000556958 CLP1Q92989 425 aaKnown RBP6.88□□□□□ -1.31
ATXN3-245ENST00000556958 MPHOSPH6Q99547 160 aaKnown RBP6.88□□□□□ -1.31
ATXN3-245ENST00000556958 FAM217BQ9NTX9 383 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-245ENST00000556958 DMDP11532 3685 aa6.88□□□□□ -1.31
ATXN3-245ENST00000556958 UNC79Q9P2D8 2635 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 DMXL1Q9Y485 3027 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 DDX11L8A8MPP1 907 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms