RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 ELP1O95163 1332 aa18.59■□□□□ 0.57
PCNX4-213ENST00000556907 IGLV3-22A0A075B6J6 115 aa18.59■□□□□ 0.57
PCNX4-213ENST00000556907 A6NJR5 290 aa18.59■□□□□ 0.57
PCNX4-213ENST00000556907 FAM86B1E9PN63 330 aa18.59■□□□□ 0.57
PCNX4-213ENST00000556907 GGPS1O95749 300 aa18.59■□□□□ 0.57
PCNX4-213ENST00000556907 FAM86B2P0C5J1 330 aa18.59■□□□□ 0.57
PCNX4-213ENST00000556907 UBA1P22314 1058 aaKnown RBP18.59■□□□□ 0.57
PCNX4-213ENST00000556907 TRAPPC10P48553 1259 aa18.59■□□□□ 0.57
PCNX4-213ENST00000556907 ORC2Q13416 577 aaPredicted RBP18.59■□□□□ 0.57
PCNX4-213ENST00000556907 FSCN1Q16658 493 aaKnown RBP18.59■□□□□ 0.57
PCNX4-213ENST00000556907 FOXD4L6Q3SYB3 417 aaPredicted RBP18.59■□□□□ 0.57
PCNX4-213ENST00000556907 RILPL1Q5EBL4 403 aa18.59■□□□□ 0.57
PCNX4-213ENST00000556907 GNASQ5JWF2 1037 aa18.59■□□□□ 0.57
PCNX4-213ENST00000556907 FOXD4L3Q6VB84 417 aaPredicted RBP18.59■□□□□ 0.57
PCNX4-213ENST00000556907 ZFP91Q96JP5 570 aaPredicted RBP18.59■□□□□ 0.57
PCNX4-213ENST00000556907 USP28Q96RU2 1077 aa18.59■□□□□ 0.57
PCNX4-213ENST00000556907 TBC1D22BQ9NU19 505 aa18.59■□□□□ 0.57
PCNX4-213ENST00000556907 POLR3EQ9NVU0 708 aa18.59■□□□□ 0.57
PCNX4-213ENST00000556907 CFAP45Q9UL16 551 aa18.59■□□□□ 0.57
PCNX4-213ENST00000556907 CABYRO75952 493 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 YEATS4O95619 227 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 KCNA2P16389 499 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 NCLP19338 710 aaKnown RBP18.58■□□□□ 0.56
PCNX4-213ENST00000556907 PTMSP20962 102 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 SOX10P56693 466 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 SP2Q02086 613 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 ARHGAP1Q07960 439 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 CSPP1Q1MSJ5 1256 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 LETM2Q2VYF4 491 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 PRR16Q569H4 304 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 CCSAPQ6IQ19 270 aaPredicted RBP18.58■□□□□ 0.56
PCNX4-213ENST00000556907 NECAB2Q7Z6G3 386 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 PPTC7Q8NI37 304 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 CYP2W1Q8TAV3 490 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 SDF4Q9BRK5 362 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 SEZ6LQ9BYH1 1024 aa18.58■□□□□ 0.56
PCNX4-213ENST00000556907 SCAND2PQ9GZW5 306 aaPredicted RBP18.58■□□□□ 0.56
PCNX4-213ENST00000556907 AGO4Q9HCK5 861 aaKnown RBP18.58■□□□□ 0.56
PCNX4-213ENST00000556907 NOL7Q9UMY1 257 aaKnown RBP18.58■□□□□ 0.56
PCNX4-213ENST00000556907 FAM205CA6NFA0 338 aa18.57■□□□□ 0.56
PCNX4-213ENST00000556907 CTAGE5O15320 804 aa18.57■□□□□ 0.56
PCNX4-213ENST00000556907 EDIL3O43854 480 aa18.57■□□□□ 0.56
PCNX4-213ENST00000556907 PPFIA4O75335 1185 aa18.57■□□□□ 0.56
PCNX4-213ENST00000556907 FARP2O94887 1054 aaPredicted RBP18.57■□□□□ 0.56
PCNX4-213ENST00000556907 ARP10275 920 aa18.57■□□□□ 0.56
PCNX4-213ENST00000556907 NASPP49321 788 aaPredicted RBP18.57■□□□□ 0.56
PCNX4-213ENST00000556907 EARS2Q5JPH6 523 aaKnown RBP18.57■□□□□ 0.56
PCNX4-213ENST00000556907 GJC2Q5T442 439 aaPredicted RBP18.57■□□□□ 0.56
PCNX4-213ENST00000556907 COPS5Q92905 334 aa18.57■□□□□ 0.56
PCNX4-213ENST00000556907 LENG1Q96BZ8 264 aaPredicted RBP18.57■□□□□ 0.56
PCNX4-213ENST00000556907 DDX25Q9UHL0 483 aaKnown RBP18.57■□□□□ 0.56
PCNX4-213ENST00000556907 PHF24Q9UPV7 400 aa18.57■□□□□ 0.56
PCNX4-213ENST00000556907 IPO5O00410 1097 aaKnown RBP18.56■□□□□ 0.56
PCNX4-213ENST00000556907 TBX3O15119 743 aa18.56■□□□□ 0.56
PCNX4-213ENST00000556907 CCNT1O60563 726 aaKnown RBP18.56■□□□□ 0.56
PCNX4-213ENST00000556907 ATP9AO75110 1047 aa18.56■□□□□ 0.56
PCNX4-213ENST00000556907 KCNA10Q16322 511 aa18.56■□□□□ 0.56
PCNX4-213ENST00000556907 DGKDQ16760 1214 aa18.56■□□□□ 0.56
PCNX4-213ENST00000556907 TMEM63BQ5T3F8 832 aa18.56■□□□□ 0.56
PCNX4-213ENST00000556907 UBE2Q1Q7Z7E8 422 aa18.56■□□□□ 0.56
PCNX4-213ENST00000556907 LENG9Q96B70 501 aa18.56■□□□□ 0.56
PCNX4-213ENST00000556907 SPATA33Q96N06 139 aa18.56■□□□□ 0.56
PCNX4-213ENST00000556907 RIT2Q99578 217 aa18.56■□□□□ 0.56
PCNX4-213ENST00000556907 ZNF577Q9BSK1 485 aa18.56■□□□□ 0.56
PCNX4-213ENST00000556907 TCEAL9Q9UHQ7 104 aa18.56■□□□□ 0.56
PCNX4-213ENST00000556907 MORC2Q9Y6X9 1032 aaPredicted RBP18.56■□□□□ 0.56
PCNX4-213ENST00000556907 NOP56O00567 594 aaKnown RBP18.55■□□□□ 0.56
PCNX4-213ENST00000556907 MYCNP04198 464 aaPredicted RBP18.55■□□□□ 0.56
PCNX4-213ENST00000556907 COL6A1P12109 1028 aa18.55■□□□□ 0.56
PCNX4-213ENST00000556907 HOXD8P13378 290 aaPredicted RBP18.55■□□□□ 0.56
PCNX4-213ENST00000556907 RGS19P49795 217 aa18.55■□□□□ 0.56
PCNX4-213ENST00000556907 MNX1P50219 401 aaPredicted RBP18.55■□□□□ 0.56
PCNX4-213ENST00000556907 TOB1P50616 345 aaPredicted RBP18.55■□□□□ 0.56
PCNX4-213ENST00000556907 ACLYP53396 1101 aa18.55■□□□□ 0.56
PCNX4-213ENST00000556907 CYFIP1Q7L576 1253 aa18.55■□□□□ 0.56
PCNX4-213ENST00000556907 AFG1LQ8WV93 481 aa18.55■□□□□ 0.56
PCNX4-213ENST00000556907 LEO1Q8WVC0 666 aaPredicted RBP18.55■□□□□ 0.56
PCNX4-213ENST00000556907 FAM20AQ96MK3 541 aa18.55■□□□□ 0.56
PCNX4-213ENST00000556907 GLT1D1Q96MS3 346 aa18.55■□□□□ 0.56
PCNX4-213ENST00000556907 FTOQ9C0B1 505 aaKnown RBP eCLIP18.55■□□□□ 0.56
PCNX4-213ENST00000556907 C11orf49Q9H6J7 331 aa18.55■□□□□ 0.56
PCNX4-213ENST00000556907 JPH1Q9HDC5 661 aaPredicted RBP18.55■□□□□ 0.56
PCNX4-213ENST00000556907 LOXHD1Q8IVV2 1947 aa18.55■□□□□ 0.56
PCNX4-213ENST00000556907 TDP2O95551 362 aa18.54■□□□□ 0.56
PCNX4-213ENST00000556907 ASGR1P07306 291 aa18.54■□□□□ 0.56
PCNX4-213ENST00000556907 MMP3P08254 477 aa18.54■□□□□ 0.56
PCNX4-213ENST00000556907 SLFN12Q8IYM2 578 aa18.54■□□□□ 0.56
PCNX4-213ENST00000556907 SEPT1Q8WYJ6 367 aa18.54■□□□□ 0.56
PCNX4-213ENST00000556907 PAWRQ96IZ0 340 aaKnown RBP18.54■□□□□ 0.56
PCNX4-213ENST00000556907 SPATA32Q96LK8 384 aa18.54■□□□□ 0.56
PCNX4-213ENST00000556907 GDPD2Q9HCC8 539 aa18.54■□□□□ 0.56
PCNX4-213ENST00000556907 SLC9A2Q9UBY0 812 aa18.54■□□□□ 0.56
PCNX4-213ENST00000556907 BRCA2P51587 3418 aa18.54■□□□□ 0.56
PCNX4-213ENST00000556907 MYADML2A6NDP7 307 aa18.53■□□□□ 0.56
PCNX4-213ENST00000556907 MSH4O15457 936 aa18.53■□□□□ 0.56
PCNX4-213ENST00000556907 BMP15O95972 392 aa18.53■□□□□ 0.56
PCNX4-213ENST00000556907 BEX3Q00994 111 aa18.53■□□□□ 0.56
PCNX4-213ENST00000556907 KRT76Q01546 638 aa18.53■□□□□ 0.56
PCNX4-213ENST00000556907 PTPAQ15257 358 aa18.53■□□□□ 0.56
PCNX4-213ENST00000556907 HSDL1Q3SXM5 330 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms