RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 NEDD9Q14511 834 aa11.84□□□□□ -0.51
SHMT2-224ENST00000556737 PTGISQ16647 500 aa11.84□□□□□ -0.51
SHMT2-224ENST00000556737 TRIM71Q2Q1W2 868 aaKnown RBP11.84□□□□□ -0.51
SHMT2-224ENST00000556737 CYFIP1Q7L576 1253 aa11.84□□□□□ -0.51
SHMT2-224ENST00000556737 TRIM50Q86XT4 487 aa11.84□□□□□ -0.51
SHMT2-224ENST00000556737 WNT8BQ93098 351 aa11.84□□□□□ -0.51
SHMT2-224ENST00000556737 PHKBQ93100 1093 aa11.84□□□□□ -0.51
SHMT2-224ENST00000556737 SENP7Q9BQF6 1050 aa11.84□□□□□ -0.51
SHMT2-224ENST00000556737 ALG1Q9BT22 464 aa11.84□□□□□ -0.51
SHMT2-224ENST00000556737 ANO3Q9BYT9 981 aa11.84□□□□□ -0.51
SHMT2-224ENST00000556737 UPF3BQ9BZI7 483 aaKnown RBP11.84□□□□□ -0.51
SHMT2-224ENST00000556737 TTYH1Q9H313 450 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-224ENST00000556737 MLXIPQ9HAP2 919 aa11.84□□□□□ -0.51
SHMT2-224ENST00000556737 TMEM260Q9NX78 707 aa11.84□□□□□ -0.51
SHMT2-224ENST00000556737 TRIP12Q14669 1992 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-224ENST00000556737 CCDC196A0A1B0GTZ2 297 aa11.83□□□□□ -0.52
SHMT2-224ENST00000556737 ESYT2A0FGR8 921 aa11.83□□□□□ -0.52
SHMT2-224ENST00000556737 RBAK-RBAKDNI3L0D1 243 aa11.83□□□□□ -0.52
SHMT2-224ENST00000556737 PRPF3O43395 683 aaKnown RBP11.83□□□□□ -0.52
SHMT2-224ENST00000556737 IFNAR1P17181 557 aa11.83□□□□□ -0.52
SHMT2-224ENST00000556737 DNAJB2P25686 324 aa11.83□□□□□ -0.52
SHMT2-224ENST00000556737 SREBF1P36956 1147 aa11.83□□□□□ -0.52
SHMT2-224ENST00000556737 GPNMBQ14956 572 aa11.83□□□□□ -0.52
SHMT2-224ENST00000556737 TRAF7Q6Q0C0 670 aa11.83□□□□□ -0.52
SHMT2-224ENST00000556737 NLRX1Q86UT6 975 aa11.83□□□□□ -0.52
SHMT2-224ENST00000556737 C7orf31Q8N865 590 aa11.83□□□□□ -0.52
SHMT2-224ENST00000556737 CAGE1Q8TC20 777 aa11.83□□□□□ -0.52
SHMT2-224ENST00000556737 NCOA5Q9HCD5 579 aaKnown RBP11.83□□□□□ -0.52
SHMT2-224ENST00000556737 JADE2Q9NQC1 790 aa11.83□□□□□ -0.52
SHMT2-224ENST00000556737 TET1Q8NFU7 2136 aa11.83□□□□□ -0.52
SHMT2-224ENST00000556737 TMEM265A0A087WTH1 108 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-224ENST00000556737 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-224ENST00000556737 SMCO2A6NFE2 343 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 GRXCR1A8MXD5 290 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 NOP56O00567 594 aaKnown RBP11.82□□□□□ -0.52
SHMT2-224ENST00000556737 FGBP02675 491 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 PFKMP08237 780 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 IQCF3P0C7M6 154 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 RFC2P35250 354 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 ZNF200P98182 395 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-224ENST00000556737 AP3B2Q13367 1082 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 BFSP2Q13515 415 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 MTMR1Q13613 665 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 ZNF697Q5TEC3 545 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 OTOP2Q7RTS6 562 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 AFAP1L1Q8TED9 768 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 CRYGNQ8WXF5 182 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 IL17RAQ96F46 866 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 CDHR1Q96JP9 859 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 FAM161BQ96MY7 647 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 RNF26Q9BY78 433 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-224ENST00000556737 ZMYND12Q9H0C1 365 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 EHMT1Q9H9B1 1298 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 NOD1Q9Y239 953 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 CYP46A1Q9Y6A2 500 aa11.82□□□□□ -0.52
SHMT2-224ENST00000556737 CHD7Q9P2D1 2997 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 H3BRB1 525 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 PPFIA3O75145 1194 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 FOSP01100 380 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-224ENST00000556737 SMIM10L2AP0DMW4 78 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 SMIM10L2BP0DMW5 78 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 CKBP12277 381 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 PBX2P40425 430 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 CCT2P78371 535 aaKnown RBP11.81□□□□□ -0.52
SHMT2-224ENST00000556737 SP4Q02446 784 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 PTK7Q13308 1070 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 LRRC8DQ7L1W4 858 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 DEFB128Q7Z7B8 93 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 SERINC5Q86VE9 423 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 CCDC155Q8N6L0 562 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 GIMAP8Q8ND71 665 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-224ENST00000556737 CYP2W1Q8TAV3 490 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 MXRA8Q9BRK3 442 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 LARP6Q9BRS8 491 aaKnown RBP11.81□□□□□ -0.52
SHMT2-224ENST00000556737 SLC26A6Q9BXS9 759 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 PBX4Q9BYU1 374 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 TUT1Q9H6E5 874 aaKnown RBP11.81□□□□□ -0.52
SHMT2-224ENST00000556737 PKD2L1Q9P0L9 805 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 STXBP5LQ9Y2K9 1186 aa11.81□□□□□ -0.52
SHMT2-224ENST00000556737 IGLV3-22A0A075B6J6 115 aa11.8□□□□□ -0.52
SHMT2-224ENST00000556737 GSTTP1A0A1W2PQM5 241 aa11.8□□□□□ -0.52
SHMT2-224ENST00000556737 CXCL10P02778 98 aa11.8□□□□□ -0.52
SHMT2-224ENST00000556737 SELPP16109 830 aa11.8□□□□□ -0.52
SHMT2-224ENST00000556737 TCF7P36402 384 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-224ENST00000556737 ARHGAP4P98171 946 aa11.8□□□□□ -0.52
SHMT2-224ENST00000556737 ITGB3BPQ13352 177 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-224ENST00000556737 MBTPS1Q14703 1052 aa11.8□□□□□ -0.52
SHMT2-224ENST00000556737 TCTN1Q2MV58 587 aa11.8□□□□□ -0.52
SHMT2-224ENST00000556737 JAKMIP3Q5VZ66 844 aa11.8□□□□□ -0.52
SHMT2-224ENST00000556737 RPUSD2Q8IZ73 545 aaKnown RBP11.8□□□□□ -0.52
SHMT2-224ENST00000556737 ZNF274Q96GC6 653 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-224ENST00000556737 GLT8D2Q9H1C3 349 aa11.8□□□□□ -0.52
SHMT2-224ENST00000556737 SEMA6BQ9H3T3 888 aa11.8□□□□□ -0.52
SHMT2-224ENST00000556737 KCNH7Q9NS40 1196 aa11.8□□□□□ -0.52
SHMT2-224ENST00000556737 EMSYQ7Z589 1322 aa11.8□□□□□ -0.52
SHMT2-224ENST00000556737 C17orf102A2RUQ5 167 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 FAM86B1E9PN63 330 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 MEIS1O00470 390 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 MAFGO15525 162 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms