RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 TRIM22Q8IYM9 498 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 REXO1Q8N1G1 1221 aaKnown RBP11.86□□□□□ -0.51
SNX6-208ENST00000556712 NECAB1Q8N987 351 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 CYP2W1Q8TAV3 490 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 CCDC12Q8WUD4 166 aaPredicted RBP11.86□□□□□ -0.51
SNX6-208ENST00000556712 C16orf70Q9BSU1 422 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 NOC4LQ9BVI4 516 aaKnown RBP11.86□□□□□ -0.51
SNX6-208ENST00000556712 WNT8AQ9H1J5 351 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 SLKQ9H2G2 1235 aaPredicted RBP11.86□□□□□ -0.51
SNX6-208ENST00000556712 C6orf50Q9HD87 102 aa11.86□□□□□ -0.51
SNX6-208ENST00000556712 HAS3O00219 553 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 PFKFB2O60825 505 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 FOSP01100 380 aaPredicted RBP11.85□□□□□ -0.51
SNX6-208ENST00000556712 LGALS2P05162 132 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 ARP10275 920 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 ACRP10323 421 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 NEK4P51957 841 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 ARHGAP4P98171 946 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 NEDD9Q14511 834 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 HIC1Q14526 733 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 ME3Q16798 604 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 KIAA0753Q2KHM9 967 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 CCDC148Q8NFR7 591 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 SCLYQ96I15 445 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 UIMC1Q96RL1 719 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 CTAGE1Q96RT6 745 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 GPR20Q99678 358 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 MXRA8Q9BRK3 442 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 KATNAL1Q9BW62 490 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 JADE2Q9NQC1 790 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 HDAC6Q9UBN7 1215 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 LAMA3Q16787 3333 aa11.85□□□□□ -0.51
SNX6-208ENST00000556712 FAM86B1E9PN63 330 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 DEXIO95424 95 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 CTDNEP1O95476 244 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 FAM86B2P0C5J1 330 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 NLRP5P59047 1200 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 ZNF200P98182 395 aaPredicted RBP11.84□□□□□ -0.51
SNX6-208ENST00000556712 PTPN11Q06124 597 aaPredicted RBP11.84□□□□□ -0.51
SNX6-208ENST00000556712 ST3GAL1Q11201 340 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 ANKRD1Q15327 319 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 PTGISQ16647 500 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 CEP55Q53EZ4 464 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 UTP14CQ5TAP6 766 aaKnown RBP11.84□□□□□ -0.51
SNX6-208ENST00000556712 CPLX2Q6PUV4 134 aaKnown RBP11.84□□□□□ -0.51
SNX6-208ENST00000556712 C7orf31Q8N865 590 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 CDHR1Q96JP9 859 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 SENP7Q9BQF6 1050 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.84□□□□□ -0.512e-8■□□□□ 10.7
SNX6-208ENST00000556712 SEZ6LQ9BYH1 1024 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 GLT8D2Q9H1C3 349 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 KCNH7Q9NS40 1196 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 GJB4Q9NTQ9 266 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 GTF2IRD1Q9UHL9 959 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 NOD1Q9Y239 953 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 GBF1Q92538 1859 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 STK36Q9NRP7 1315 aa11.84□□□□□ -0.51
SNX6-208ENST00000556712 H3BRB1 525 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 DDX39AO00148 427 aaKnown RBP11.83□□□□□ -0.52
SNX6-208ENST00000556712 EIF5BO60841 1220 aaKnown RBP11.83□□□□□ -0.52
SNX6-208ENST00000556712 PPFIA4O75335 1185 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 SLC34A2O95436 690 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 SUPT20HL2P0C7V6 817 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 GNA11P29992 359 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 TCF7P36402 384 aaPredicted RBP11.83□□□□□ -0.52
SNX6-208ENST00000556712 ZNF76P36508 570 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 FOSBP53539 338 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 ITGB3BPQ13352 177 aaPredicted RBP11.83□□□□□ -0.52
SNX6-208ENST00000556712 PPIGQ13427 754 aaKnown RBP eCLIP11.83□□□□□ -0.52
SNX6-208ENST00000556712 NPY5RQ15761 445 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 LRIT3Q3SXY7 679 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 C16orf59Q7L2K0 433 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 SESTD1Q86VW0 696 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 TMEM199Q8N511 208 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 CRYGNQ8WXF5 182 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 DHX38Q92620 1227 aaKnown RBP11.83□□□□□ -0.52
SNX6-208ENST00000556712 WNT8BQ93098 351 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 GTF3C6Q969F1 213 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 RNPC3Q96LT9 517 aaKnown RBP11.83□□□□□ -0.52
SNX6-208ENST00000556712 KIF2CQ99661 725 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 TUT1Q9H6E5 874 aaKnown RBP11.83□□□□□ -0.52
SNX6-208ENST00000556712 AGO4Q9HCK5 861 aaKnown RBP11.83□□□□□ -0.52
SNX6-208ENST00000556712 KCNJ14Q9UNX9 436 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 SZT2Q5T011 3432 aa11.83□□□□□ -0.52
SNX6-208ENST00000556712 SIP14410 1827 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 IGLV3-22A0A075B6J6 115 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 GSTTP1A0A1W2PQM5 241 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 JAK2O60674 1132 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 CDKL5O76039 1030 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 SMIM10L2AP0DMW4 78 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 SMIM10L2BP0DMW5 78 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 KCNA4P22459 653 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 MARK3P27448 753 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 CACNB1Q02641 598 aaPredicted RBP11.82□□□□□ -0.52
SNX6-208ENST00000556712 TMEM240Q5SV17 173 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 PLA2G4DQ86XP0 818 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 TEX2Q8IWB9 1127 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 BICD2Q8TD16 824 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 VWCEQ96DN2 955 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 C22orf23Q9BZE7 217 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms