RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 LAPTM5Q13571 262 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 EIF4A2Q14240 407 aaKnown RBP6.21□□□□□ -1.42
ATXN3-243ENST00000556671 SSPNQ14714 243 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 ZNF385BQ569K4 471 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 RTP2Q5QGT7 225 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 TDRD10Q5VZ19 366 aaKnown RBP6.21□□□□□ -1.42
ATXN3-243ENST00000556671 LILRA6Q6PI73 481 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 PPFIBP1Q86W92 1011 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 TMEM52Q8NDY8 209 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 RNF34Q969K3 372 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 CFAP53Q96M91 514 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 DSCC1Q9BVC3 393 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 SIRT5Q9NXA8 310 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 ACSL6Q9UKU0 697 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 LRRC37A3O60309 1634 aa6.21□□□□□ -1.42
ATXN3-243ENST00000556671 BTAF1O14981 1849 aa6.2□□□□□ -1.42
ATXN3-243ENST00000556671 NSD2O96028 1365 aa6.2□□□□□ -1.42
ATXN3-243ENST00000556671 INSRP06213 1382 aa6.2□□□□□ -1.42
ATXN3-243ENST00000556671 RFXAPO00287 272 aa6.2□□□□□ -1.42
ATXN3-243ENST00000556671 ABLIM1O14639 778 aa6.2□□□□□ -1.42
ATXN3-243ENST00000556671 DIAPH1O60610 1272 aaKnown RBP6.2□□□□□ -1.42
ATXN3-243ENST00000556671 HMOX1P09601 288 aa6.2□□□□□ -1.42
ATXN3-243ENST00000556671 OLFML2BQ68BL8 750 aa6.2□□□□□ -1.42
ATXN3-243ENST00000556671 SULT6B1Q6IMI4 303 aa6.2□□□□□ -1.42
ATXN3-243ENST00000556671 SIGLEC10Q96LC7 697 aa6.2□□□□□ -1.42
ATXN3-243ENST00000556671 SLC12A9Q9BXP2 914 aa6.2□□□□□ -1.42
ATXN3-243ENST00000556671 CNTD2Q9H8S5 307 aa6.2□□□□□ -1.42
ATXN3-243ENST00000556671 KLHL14Q9P2G3 628 aa6.2□□□□□ -1.42
ATXN3-243ENST00000556671 DDX41Q9UJV9 622 aaKnown RBP6.2□□□□□ -1.42
ATXN3-243ENST00000556671 DLG5Q8TDM6 1919 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 N4BP3O15049 544 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 KCNQ2O43526 872 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 MPOP05164 745 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 PRKCAP17252 672 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 GUCY2CP25092 1073 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 ARL4AP40617 200 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 EPHB3P54753 998 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 CYP4F8P98187 520 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 EZH2Q15910 746 aaKnown RBP6.19□□□□□ -1.42
ATXN3-243ENST00000556671 ZYXQ15942 572 aaKnown RBP6.19□□□□□ -1.42
ATXN3-243ENST00000556671 PLEKHO1Q53GL0 409 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-243ENST00000556671 AXDND1Q5T1B0 1012 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-243ENST00000556671 TCERG1LQ5VWI1 586 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 DCAF15Q66K64 600 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 UNC5AQ6ZN44 842 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 PTF1AQ7RTS3 328 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 NUP43Q8NFH3 380 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 JMJD8Q96S16 334 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 SRRTQ9BXP5 876 aaKnown RBP6.19□□□□□ -1.42
ATXN3-243ENST00000556671 GP6Q9HCN6 339 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 TNFRSF12AQ9NP84 129 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 PPT2Q9UMR5 302 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 IRAK3Q9Y616 596 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 ABCC6O95255 1503 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 DOT1LQ8TEK3 1739 aa6.19□□□□□ -1.42
ATXN3-243ENST00000556671 TNS1Q9HBL0 1735 aaKnown RBP6.19□□□□□ -1.42
ATXN3-243ENST00000556671 RTL1A6NKG5 1358 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 H0Y8X5 98 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 IRS4O14654 1257 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-243ENST00000556671 RECKO95980 971 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 PI3P19957 117 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 VAMP1P23763 118 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 PPP2R1AP30153 589 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 ZNF445P59923 1031 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 FBXW10Q5XX13 1052 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 CWF19L1Q69YN2 538 aaKnown RBP6.18□□□□□ -1.42
ATXN3-243ENST00000556671 RUFY4Q6ZNE9 571 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 LSRQ86X29 649 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-243ENST00000556671 TMEM151BQ8IW70 566 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 IMPACTQ9P2X3 320 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 NUDCQ9Y266 331 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 FHOD1Q9Y613 1164 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 SHANK3Q9BYB0 1731 aa6.18□□□□□ -1.42
ATXN3-243ENST00000556671 OVOS2A0A0G2JMS6 1433 aa6.17□□□□□ -1.42
ATXN3-243ENST00000556671 GSTM1P09488 218 aa6.17□□□□□ -1.42
ATXN3-243ENST00000556671 U2AF1L5P0DN76 240 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-243ENST00000556671 HOXA5P20719 270 aa6.17□□□□□ -1.42
ATXN3-243ENST00000556671 CD247P20963 164 aa6.17□□□□□ -1.42
ATXN3-243ENST00000556671 CDR1P51861 262 aa6.17□□□□□ -1.42
ATXN3-243ENST00000556671 U2AF1Q01081 240 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-243ENST00000556671 TMEM62Q0P6H9 643 aa6.17□□□□□ -1.42
ATXN3-243ENST00000556671 COL9A2Q14055 689 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-243ENST00000556671 CBX2Q14781 532 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-243ENST00000556671 RAB3GAP1Q15042 981 aa6.17□□□□□ -1.42
ATXN3-243ENST00000556671 C1orf141Q5JVX7 400 aa6.17□□□□□ -1.42
ATXN3-243ENST00000556671 NOL9Q5SY16 702 aaKnown RBP6.17□□□□□ -1.42
ATXN3-243ENST00000556671 ZNF530Q6P9A1 599 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-243ENST00000556671 PANK1Q8TE04 598 aa6.17□□□□□ -1.42
ATXN3-243ENST00000556671 MZB1Q8WU39 189 aa6.17□□□□□ -1.42
ATXN3-243ENST00000556671 PARD6AQ9NPB6 346 aa6.17□□□□□ -1.42
ATXN3-243ENST00000556671 ZNF214Q9UL59 606 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-243ENST00000556671 KIF24Q5T7B8 1368 aa6.17□□□□□ -1.42
ATXN3-243ENST00000556671 SCN11AQ9UI33 1791 aa6.16□□□□□ -1.42
ATXN3-243ENST00000556671 SCAMP3O14828 347 aaKnown RBP6.16□□□□□ -1.42
ATXN3-243ENST00000556671 FGF10O15520 208 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-243ENST00000556671 TP53P04637 393 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-243ENST00000556671 BMP7P18075 431 aa6.16□□□□□ -1.42
ATXN3-243ENST00000556671 IL13P35225 146 aa6.16□□□□□ -1.42
ATXN3-243ENST00000556671 MVKQ03426 396 aa6.16□□□□□ -1.42
ATXN3-243ENST00000556671 HLA-DQA1Q5Y7H0 255 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms