RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 NFKBIEO00221 500 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 TBX3O15119 743 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 TBC1D12O60347 775 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 TADA3O75528 432 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 TFRCP02786 760 aaKnown RBP11.25□□□□□ -0.61
TMEM260-211ENST00000556648 CYP3A4P08684 503 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 TRIM21P19474 475 aaKnown RBP11.25□□□□□ -0.61
TMEM260-211ENST00000556648 INPP5BP32019 993 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 ZNF76P36508 570 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 KIF4BQ2VIQ3 1234 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 ZNF569Q5MCW4 686 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 FKBP1CQ5VVH2 108 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 CIAPIN1Q6FI81 312 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 SLC35F6Q8N357 371 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 SCFD1Q8WVM8 642 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 ERGIC2Q96RQ1 377 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 ZNF341Q9BYN7 854 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 ZHX3Q9H4I2 956 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 RGL1Q9NZL6 768 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 PIM2Q9P1W9 311 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 SIK3Q9Y2K2 1263 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 PHF20L1A8MW92 1017 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 RSPH10B2B2RC85 870 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 NDUFA10O95299 355 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 RSPH10BP0C881 870 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 MAP3K9P80192 1104 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 LRRC63Q05C16 580 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 RASA3Q14644 834 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 MEA1Q16626 185 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 HERC4Q5GLZ8 1057 aaPredicted RBP11.24□□□□□ -0.61
TMEM260-211ENST00000556648 HAUS3Q68CZ6 603 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 MCTP2Q6DN12 878 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 CCDC65Q8IXS2 484 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 AGBL1Q96MI9 1066 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 EIF2AK1Q9BQI3 630 aaKnown RBP11.24□□□□□ -0.61
TMEM260-211ENST00000556648 RUSC1Q9BVN2 902 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 CCDC94Q9BW85 323 aaPredicted RBP11.24□□□□□ -0.61
TMEM260-211ENST00000556648 EPC1Q9H2F5 836 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 TAOK3Q9H2K8 898 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 NDST4Q9H3R1 872 aa11.24□□□□□ -0.61
TMEM260-211ENST00000556648 FRMD3A2A2Y4 597 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 GCOM1H8Y6P7 765 aaPredicted RBP11.23□□□□□ -0.61
TMEM260-211ENST00000556648 CHMP2AO43633 222 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 KRT18P05783 430 aaKnown RBP11.23□□□□□ -0.61
TMEM260-211ENST00000556648 POLR2MP0CAP2 368 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 RPA1P27694 616 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 POLD1P28340 1107 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 RASSF7Q02833 373 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 GIT2Q14161 759 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 CTTNQ14247 550 aaKnown RBP11.23□□□□□ -0.61
TMEM260-211ENST00000556648 MAN2A1Q16706 1144 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 FKBP15Q5T1M5 1219 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 LDHDQ86WU2 507 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 SFR1Q86XK3 245 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 MNS1Q8NEH6 495 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 SLC16A10Q8TF71 515 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 FAM20AQ96MK3 541 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 TEPSINQ96N21 525 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 TSG101Q99816 390 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 REEP2Q9BRK0 252 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 KCTD10Q9H3F6 313 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 FAM207AQ9NSI2 230 aaPredicted RBP11.23□□□□□ -0.61
TMEM260-211ENST00000556648 CGNQ9P2M7 1197 aaKnown RBP11.23□□□□□ -0.61
TMEM260-211ENST00000556648 PPP1R1BQ9UD71 204 aaPredicted RBP11.23□□□□□ -0.61
TMEM260-211ENST00000556648 EPN1Q9Y6I3 576 aaPredicted RBP11.23□□□□□ -0.61
TMEM260-211ENST00000556648 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 SLC26A4O43511 780 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 KIF5CO60282 957 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 PLEKP08567 350 aaPredicted RBP11.23□□□□□ -0.61
TMEM260-211ENST00000556648 MYBP10242 640 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 PRELPP51888 382 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 ZBED6P86452 979 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 PPP2R3AQ06190 1150 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 ARHGAP29Q52LW3 1261 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 DALRD3Q5D0E6 543 aaKnown RBP11.23□□□□□ -0.61
TMEM260-211ENST00000556648 ZNF397Q8NF99 534 aaPredicted RBP11.23□□□□□ -0.61
TMEM260-211ENST00000556648 ERMNQ8TAM6 284 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 SMCR8Q8TEV9 937 aaPredicted RBP11.23□□□□□ -0.61
TMEM260-211ENST00000556648 CHURC1Q8WUH1 139 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 FEZ1Q99689 392 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 VPS33BQ9H267 617 aa11.23□□□□□ -0.61
TMEM260-211ENST00000556648 ZNF536O15090 1300 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 ABCB11O95342 1321 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 RCCD1A6NED2 376 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 TRAF5O00463 557 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 ZBTB39O15060 712 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 ARP10275 920 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 HOXD13P35453 343 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 PTGER2P43116 358 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 APBA1Q02410 837 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 MAP3K10Q02779 954 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 FAM160B2Q86V87 743 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 SYT2Q8N9I0 419 aaPredicted RBP11.22□□□□□ -0.61
TMEM260-211ENST00000556648 DYDC2Q96IM9 177 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 NUP58Q9BVL2 599 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 BMP2KQ9NSY1 1161 aaPredicted RBP11.22□□□□□ -0.61
TMEM260-211ENST00000556648 COL20A1Q9P218 1284 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 FEM1BQ9UK73 627 aa11.22□□□□□ -0.61
TMEM260-211ENST00000556648 KCNMA1Q12791 1236 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms