RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 FRMD3A2A2Y4 597 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 DDTLA6NHG4 134 aaPredicted RBP5.98□□□□□ -1.45
GPHN-213ENST00000556501 ZNF263O14978 683 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 TBX3O15119 743 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 EPHB6O15197 1021 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 NKRFO15226 690 aaKnown RBP eCLIP5.98□□□□□ -1.45
GPHN-213ENST00000556501 GPR37O15354 613 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 ECE2O60344 883 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 ERLIN1O75477 346 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 LCA5LO95447 670 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 EEF2P13639 858 aaKnown RBP5.98□□□□□ -1.45
GPHN-213ENST00000556501 IDEP14735 1019 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 SLC1A4P43007 532 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 MARSP56192 900 aaKnown RBP5.98□□□□□ -1.45
GPHN-213ENST00000556501 CKAP4Q07065 602 aaKnown RBP5.98□□□□□ -1.45
GPHN-213ENST00000556501 SPIRE1Q08AE8 756 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 ECM1Q16610 540 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 CERKLQ49MI3 558 aaPredicted RBP5.98□□□□□ -1.45
GPHN-213ENST00000556501 SLFN13Q68D06 897 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 PDXDC1Q6P996 788 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 KIAA1328Q86T90 577 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 CCDC84Q86UT8 332 aaPredicted RBP5.98□□□□□ -1.45
GPHN-213ENST00000556501 GPBP1Q86WP2 473 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 C2CD5Q86YS7 1000 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 SIAH1Q8IUQ4 282 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 CCDC65Q8IXS2 484 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 ETNPPLQ8TBG4 499 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 BAP1Q92560 729 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 RPGRIP1Q96KN7 1286 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 PCMTD1Q96MG8 357 aaPredicted RBP5.98□□□□□ -1.45
GPHN-213ENST00000556501 DCBLD2Q96PD2 775 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 PNKPQ96T60 521 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 FUT8Q9BYC5 575 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 TRIM34Q9BYJ4 488 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 LACRTQ9GZZ8 138 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 GBP3Q9H0R5 595 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 ZSWIM4Q9H7M6 989 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 NHEJ1Q9H9Q4 299 aaPredicted RBP5.98□□□□□ -1.45
GPHN-213ENST00000556501 DBNDD1Q9H9R9 158 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 ST7Q9NRC1 585 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 PLSCR2Q9NRY7 297 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 PANK4Q9NVE7 773 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 PI4KBQ9UBF8 816 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 SERPINA10Q9UK55 444 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 PCDHA12Q9UN75 941 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 PCDHA2Q9Y5H9 948 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 PCDHA1Q9Y5I3 950 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 COL4A3BPQ9Y5P4 624 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 EP400Q96L91 3159 aa5.98□□□□□ -1.45
GPHN-213ENST00000556501 SSU72P8A0A1W2PR75 194 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 POTEB3A0JP26 581 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 RCCD1A6NED2 376 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 FAM196BA6NMK8 535 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 POTECB2RU33 542 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 USP17L15C9J2P7 530 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 USP17L13C9JLJ4 530 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 USP17L11C9JVI0 530 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 USP17L18D6R9N7 530 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 USP17L22D6RA61 530 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 USP17L17D6RBQ6 530 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 USP17L19D6RCP7 530 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 USP17L20D6RJB6 530 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 E9PMD0 336 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 MAP2K7O14733 419 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 MEIS2O14770 477 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 PJA2O43164 708 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 MARCH6O60337 910 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 ENTPD3O75355 529 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 MED24O75448 989 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 GNA14O95837 355 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 NDUFB10O96000 172 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 FOSP01100 380 aaPredicted RBP5.97□□□□□ -1.45
GPHN-213ENST00000556501 TFRCP02786 760 aaKnown RBP5.97□□□□□ -1.45
GPHN-213ENST00000556501 ATP1A1P05023 1023 aaKnown RBP5.97□□□□□ -1.45
GPHN-213ENST00000556501 PLA2G4BP0C869 781 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 SLURP2P0DP57 97 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 CYP11B2P19099 503 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 CIITAP33076 1130 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 SREBF1P36956 1147 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 KIF11P52732 1056 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 CACNB3P54284 484 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 USP14P54578 494 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 ARHGAP4P98171 946 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 FKBP3Q00688 224 aaKnown RBP5.97□□□□□ -1.45
GPHN-213ENST00000556501 USP17L24Q0WX57 530 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 LRRC41Q15345 812 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 SPA17Q15506 151 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 ABCB5Q2M3G0 1257 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 SHROOM1Q2M3G4 852 aaPredicted RBP5.97□□□□□ -1.45
GPHN-213ENST00000556501 EDRF1Q3B7T1 1238 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 Q4G0T1 1027 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 CCDC40Q4G0X9 1142 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 BEND6Q5SZJ8 279 aaPredicted RBP5.97□□□□□ -1.45
GPHN-213ENST00000556501 SYDE2Q5VT97 1194 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 HAUS3Q68CZ6 603 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 NCAPH2Q6IBW4 605 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 WDR93Q6P2C0 686 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 USP17L6PQ6QN14 398 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 POTEBQ6S5H4 581 aa5.97□□□□□ -1.45
GPHN-213ENST00000556501 BTNL9Q6UXG8 535 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms