RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 IRX5P78411 483 aaPredicted RBP15.88■□□□□ 0.13
VIPAS39-208ENST00000556412 ARHGAP1Q07960 439 aa15.88■□□□□ 0.13
VIPAS39-208ENST00000556412 GIMAP8Q8ND71 665 aaPredicted RBP15.88■□□□□ 0.13
VIPAS39-208ENST00000556412 ETNPPLQ8TBG4 499 aa15.88■□□□□ 0.13
VIPAS39-208ENST00000556412 SENP7Q9BQF6 1050 aa15.88■□□□□ 0.13
VIPAS39-208ENST00000556412 JPH1Q9HDC5 661 aaPredicted RBP15.88■□□□□ 0.13
VIPAS39-208ENST00000556412 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.88■□□□□ 0.13
VIPAS39-208ENST00000556412 TFIP11Q9UBB9 837 aaKnown RBP15.88■□□□□ 0.13
VIPAS39-208ENST00000556412 CLIC4Q9Y696 253 aa15.88■□□□□ 0.13
VIPAS39-208ENST00000556412 SYNRGQ9UMZ2 1314 aa15.88■□□□□ 0.13
VIPAS39-208ENST00000556412 FARP2O94887 1054 aaPredicted RBP15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 OR52Z1P0C646 297 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 NCLP19338 710 aaKnown RBP15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 BEX3Q00994 111 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 PTGDRQ13258 359 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 ORC2Q13416 577 aaPredicted RBP15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 LAMC2Q13753 1193 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 SF3A1Q15459 793 aaKnown RBP15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 LHX8Q68G74 356 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 METTL7BQ6UX53 244 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 TNS4Q8IZW8 715 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 AFG1LQ8WV93 481 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 SLC5A5Q92911 643 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 ZNF396Q96N95 335 aaPredicted RBP15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 USP28Q96RU2 1077 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 TEKT3Q9BXF9 490 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 KCNMB3Q9NPA1 279 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 TBC1D22BQ9NU19 505 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 CHMP5Q9NZZ3 219 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 CIZ1Q9ULV3 898 aaPredicted RBP15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 LRRC37A2A6NM11 1700 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 ZNFX1Q9P2E3 1918 aaKnown RBP15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 TFRCP02786 760 aaKnown RBP15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 U2AF1L4Q8WU68 220 aaKnown RBP15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 HAS1Q92839 578 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 CHAMP1Q96JM3 812 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 FAM20AQ96MK3 541 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 SLC9A2Q9UBY0 812 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 CEP131Q9UPN4 1083 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 ATP6V1DQ9Y5K8 247 aa15.87■□□□□ 0.13
VIPAS39-208ENST00000556412 MYADML2A6NDP7 307 aa15.86■□□□□ 0.13
VIPAS39-208ENST00000556412 TBX3O15119 743 aa15.86■□□□□ 0.13
VIPAS39-208ENST00000556412 GJB1P08034 283 aa15.86■□□□□ 0.13
VIPAS39-208ENST00000556412 DNM1Q05193 864 aaKnown RBP15.86■□□□□ 0.13
VIPAS39-208ENST00000556412 FSCN1Q16658 493 aaKnown RBP15.86■□□□□ 0.13
VIPAS39-208ENST00000556412 HSDL1Q3SXM5 330 aa15.86■□□□□ 0.13
VIPAS39-208ENST00000556412 GNASQ5JWF2 1037 aa15.86■□□□□ 0.13
VIPAS39-208ENST00000556412 SLFN12Q8IYM2 578 aa15.86■□□□□ 0.13
VIPAS39-208ENST00000556412 RIT2Q99578 217 aa15.86■□□□□ 0.13
VIPAS39-208ENST00000556412 Q9Y3F1 56 aa15.86■□□□□ 0.13
VIPAS39-208ENST00000556412 TELO2Q9Y4R8 837 aa15.86■□□□□ 0.13
VIPAS39-208ENST00000556412 SAMM50Q9Y512 469 aa15.86■□□□□ 0.13
VIPAS39-208ENST00000556412 NFASCO94856 1347 aa15.86■□□□□ 0.13
VIPAS39-208ENST00000556412 DHX15O43143 795 aaKnown RBP15.85■□□□□ 0.13
VIPAS39-208ENST00000556412 CPT1AP50416 773 aa15.85■□□□□ 0.13
VIPAS39-208ENST00000556412 GJA9P57773 515 aa15.85■□□□□ 0.13
VIPAS39-208ENST00000556412 BRDTQ58F21 947 aaPredicted RBP15.85■□□□□ 0.13
VIPAS39-208ENST00000556412 RNF180Q86T96 592 aa15.85■□□□□ 0.13
VIPAS39-208ENST00000556412 ABHD8Q96I13 439 aa15.85■□□□□ 0.13
VIPAS39-208ENST00000556412 MTMR9Q96QG7 549 aa15.85■□□□□ 0.13
VIPAS39-208ENST00000556412 TTC12Q9H892 705 aaPredicted RBP15.85■□□□□ 0.13
VIPAS39-208ENST00000556412 POTEFA5A3E0 1075 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 ADAMTS4O75173 837 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 PSMD10O75832 226 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 SGPL1O95470 568 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 CCNE2O96020 404 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 NCAPH2Q6IBW4 605 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 PPTC7Q8NI37 304 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 UNC45AQ9H3U1 944 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 PCDHA12Q9UN75 941 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 BMP15O95972 392 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 MMP3P08254 477 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 MYL3P08590 195 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 TECP42680 631 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 CHMP4BP1P59074 171 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 ACTR2P61160 394 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 ATP2C1P98194 919 aaPredicted RBP15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 KRT76Q01546 638 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 STK38Q15208 465 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 LRRC41Q15345 812 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 TMEM266Q2M3C6 531 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 UTP14CQ5TAP6 766 aaKnown RBP15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 C4orf32Q8N8J7 132 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 ARRDC4Q8NCT1 418 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 EMID1Q96A84 441 aaPredicted RBP15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 GPR20Q99678 358 aa15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 UPF3AQ9H1J1 476 aaKnown RBP15.84■□□□□ 0.13
VIPAS39-208ENST00000556412 CENPFP49454 3210 aa15.83■□□□□ 0.12
VIPAS39-208ENST00000556412 ELP1O95163 1332 aa15.83■□□□□ 0.12
VIPAS39-208ENST00000556412 CCDC85CA6NKD9 419 aa15.83■□□□□ 0.12
VIPAS39-208ENST00000556412 LAD1O00515 517 aa15.83■□□□□ 0.12
VIPAS39-208ENST00000556412 MARCKSP29966 332 aaPredicted RBP15.83■□□□□ 0.12
VIPAS39-208ENST00000556412 GJA8P48165 433 aa15.83■□□□□ 0.12
VIPAS39-208ENST00000556412 DTHD1Q6ZMT9 781 aa15.83■□□□□ 0.12
VIPAS39-208ENST00000556412 POLR3EQ9NVU0 708 aa15.83■□□□□ 0.12
VIPAS39-208ENST00000556412 VAV3Q9UKW4 847 aa15.83■□□□□ 0.12
VIPAS39-208ENST00000556412 CFAP45Q9UL16 551 aa15.83■□□□□ 0.12
VIPAS39-208ENST00000556412 VWA3AA6NCI4 1184 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 A6NJR5 290 aa15.82■□□□□ 0.12
VIPAS39-208ENST00000556412 KBTBD13C9JR72 458 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms