RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TLK2Q86UE8 772 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 TRIM22Q8IYM9 498 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 FAM177A1Q8N128 213 aaPredicted RBP11.06□□□□□ -0.64
SRP54-210ENST00000556380 NSUN7Q8NE18 718 aaKnown RBP11.06□□□□□ -0.64
SRP54-210ENST00000556380 CRYGNQ8WXF5 182 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 COPS5Q92905 334 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 SENP6Q9GZR1 1112 aaPredicted RBP11.06□□□□□ -0.64
SRP54-210ENST00000556380 TMEM260Q9NX78 707 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 VPS54Q9P1Q0 977 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 A6NJR5 290 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 KBTBD13C9JR72 458 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 M0R2N6 131 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 CD2BP2O95400 341 aaKnown RBP11.05□□□□□ -0.64
SRP54-210ENST00000556380 C6orf222P0C671 652 aaPredicted RBP11.05□□□□□ -0.64
SRP54-210ENST00000556380 TGFB3P10600 412 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 ACLYP53396 1101 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 BEX3Q00994 111 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 AP3B2Q13367 1082 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 SNX17Q15036 470 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 E2F4Q16254 413 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 FSCN1Q16658 493 aaKnown RBP11.05□□□□□ -0.64
SRP54-210ENST00000556380 LY6KQ17RY6 165 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 LRRC26Q2I0M4 334 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 GNASQ5JWF2 1037 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 KCNV1Q6PIU1 500 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 CCDC12Q8WUD4 166 aaPredicted RBP11.05□□□□□ -0.64
SRP54-210ENST00000556380 EMID1Q96A84 441 aaPredicted RBP11.05□□□□□ -0.64
SRP54-210ENST00000556380 ZSCAN31Q96LW9 406 aaPredicted RBP11.05□□□□□ -0.64
SRP54-210ENST00000556380 AP5M1Q9H0R1 490 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 SPC25Q9HBM1 224 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 C6orf50Q9HD87 102 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 UBIAD1Q9Y5Z9 338 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 FRMPD3Q5JV73 1810 aa11.05□□□□□ -0.64
SRP54-210ENST00000556380 A0A1W2PQ45 241 aaPredicted RBP11.04□□□□□ -0.64
SRP54-210ENST00000556380 A0A1W2PQY0 241 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 MOXD2PA6NHM9 499 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 SPDYE3A6NKU9 549 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 JAK2O60674 1132 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 ASGR1P07306 291 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 ITGB5P18084 799 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 GNA11P29992 359 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 SREBF1P36956 1147 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 C1orf53Q5VUE5 145 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 MYSM1Q5VVJ2 828 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 JAKMIP3Q5VZ66 844 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 SLC39A5Q6ZMH5 540 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 PCSK9Q8NBP7 692 aaKnown RBP11.04□□□□□ -0.64
SRP54-210ENST00000556380 DAGLBQ8NCG7 672 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 CCDC148Q8NFR7 591 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 FERMT2Q96AC1 680 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 PGBD1Q96JS3 809 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 HTATIP2Q9BUP3 242 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 ANO3Q9BYT9 981 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 BCAS3Q9H6U6 928 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 SH2B1Q9NRF2 756 aaPredicted RBP11.04□□□□□ -0.64
SRP54-210ENST00000556380 GJB4Q9NTQ9 266 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 WDR70Q9NW82 654 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 RTEL1Q9NZ71 1219 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 ORC3Q9UBD5 711 aaPredicted RBP11.04□□□□□ -0.64
SRP54-210ENST00000556380 PCDHA4Q9UN74 947 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 MRVI1Q9Y6F6 885 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 ELP1O95163 1332 aa11.04□□□□□ -0.64
SRP54-210ENST00000556380 RANBP2P49792 3224 aaKnown RBP11.03□□□□□ -0.64
SRP54-210ENST00000556380 MEIS1O00470 390 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 GH1P01241 217 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 CYP3A4P08684 503 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 HOXD8P13378 290 aaPredicted RBP11.03□□□□□ -0.64
SRP54-210ENST00000556380 UBA1P22314 1058 aaKnown RBP11.03□□□□□ -0.64
SRP54-210ENST00000556380 CDK7P50613 346 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 LAMC2Q13753 1193 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 CELF3Q5SZQ8 465 aaKnown RBP11.03□□□□□ -0.64
SRP54-210ENST00000556380 MCTP2Q6DN12 878 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 GALNT17Q6IS24 598 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 REXO1Q8N1G1 1221 aaKnown RBP11.03□□□□□ -0.64
SRP54-210ENST00000556380 SLC43A3Q8NBI5 491 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 OR6J1Q8NGC5 347 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 CYP2W1Q8TAV3 490 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 BICD2Q8TD16 824 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 RASGRP4Q8TDF6 673 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 GPRASP2Q96D09 838 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 LLPHQ9BRT6 129 aaKnown RBP11.03□□□□□ -0.64
SRP54-210ENST00000556380 PHF20Q9BVI0 1012 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 JADE2Q9NQC1 790 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 KCNJ14Q9UNX9 436 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 GRIN2DO15399 1336 aa11.03□□□□□ -0.64
SRP54-210ENST00000556380 MAFGO15525 162 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 FIBPO43427 364 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 ATP9AO75110 1047 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 KCNA2P16389 499 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 CPT1AP50416 773 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 NLRP5P59047 1200 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 ARHGAP4P98171 946 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 PURAQ00577 322 aaKnown RBP11.02□□□□□ -0.65
SRP54-210ENST00000556380 GNPTABQ3T906 1256 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 CEP55Q53EZ4 464 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 CXCL17Q6UXB2 119 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 CCDC83Q8IWF9 413 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 BLIDQ8IZY5 108 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 AFG1LQ8WV93 481 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 DPF3Q92784 378 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms