RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 FYB1O15117 783 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 SIGLEC6O43699 453 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 PNLIPP16233 465 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 TRHRP34981 398 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-241ENST00000556374 BUD31P41223 144 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-241ENST00000556374 RBM25P49756 843 aaKnown RBP5.35□□□□□ -1.55
ATXN3-241ENST00000556374 MRE11P49959 708 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 FAM160A1Q05DH4 1040 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 SLC15A2Q16348 729 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 TWISTNBQ3B726 338 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-241ENST00000556374 TIGD5Q53EQ6 642 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 ARSHQ5FYA8 562 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 ANKRD45Q5TZF3 282 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.35□□□□□ -1.55
ATXN3-241ENST00000556374 JMYQ8N9B5 988 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 ZNF526Q8TF50 670 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-241ENST00000556374 SNX21Q969T3 373 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 FCRL2Q96LA5 508 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-241ENST00000556374 NT5C1AQ9BXI3 368 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 ANTXR1Q9H6X2 564 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 ZBTB40Q9NUA8 1239 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 TCFL5Q9UL49 500 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 PCDHB14Q9Y5E9 798 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 DLG5Q8TDM6 1919 aa5.35□□□□□ -1.55
ATXN3-241ENST00000556374 COL5A2P05997 1499 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-241ENST00000556374 BCL9O00512 1426 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 CPSF1Q10570 1443 aaKnown RBP5.34□□□□□ -1.55
ATXN3-241ENST00000556374 NOTOA8MTQ0 251 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 PSPNO60542 156 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 CLEC3AO75596 197 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 IMPDH2P12268 514 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 PDE6BP35913 854 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 YBX1P67809 324 aaKnown RBP5.34□□□□□ -1.55
ATXN3-241ENST00000556374 CAP1Q01518 475 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 LAPTM5Q13571 262 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 MRPL58Q14197 206 aaKnown RBP5.34□□□□□ -1.55
ATXN3-241ENST00000556374 SLC14A2Q15849 920 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 GALNT18Q6P9A2 607 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 NLRC3Q7RTR2 1065 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 ZNF605Q86T29 641 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 SLITRK4Q8IW52 837 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 NLGN2Q8NFZ4 835 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 ZNF296Q8WUU4 475 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-241ENST00000556374 ATG4CQ96DT6 458 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 BRMS1Q9HCU9 246 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 GCM1Q9NP62 436 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 EBF1Q9UH73 591 aa5.34□□□□□ -1.55
ATXN3-241ENST00000556374 FAM208AQ9UK61 1670 aaKnown RBP5.34□□□□□ -1.56
ATXN3-241ENST00000556374 A0A1W2PQ45 241 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-241ENST00000556374 A0A1W2PQY0 241 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 WTIPA6NIX2 430 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-241ENST00000556374 HMMRO75330 724 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 HMOX1P09601 288 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 MCCP23508 829 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 BMP8BP34820 402 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 ERVFRD-1P60508 538 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 RABEP1Q15276 862 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 TXNRD1Q16881 649 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 TCERG1LQ5VWI1 586 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 OVOS1Q6IE37 1185 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 WAPLQ7Z5K2 1190 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 TAB3Q8N5C8 712 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-241ENST00000556374 FBXO27Q8NI29 283 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 SMARCC1Q92922 1105 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-241ENST00000556374 DHRS1Q96LJ7 313 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 GZF1Q9H116 711 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-241ENST00000556374 ZMYM5Q9UJ78 669 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 CNOT6Q9ULM6 557 aaKnown RBP5.33□□□□□ -1.56
ATXN3-241ENST00000556374 PKD1L3Q7Z443 1732 aa5.33□□□□□ -1.56
ATXN3-241ENST00000556374 PTPRCP08575 1304 aa5.32□□□□□ -1.56
ATXN3-241ENST00000556374 TNRC6CQ9HCJ0 1690 aaKnown RBP5.32□□□□□ -1.56
ATXN3-241ENST00000556374 TMEM82A0PJX8 343 aa5.32□□□□□ -1.56
ATXN3-241ENST00000556374 REC8O95072 547 aa5.32□□□□□ -1.56
ATXN3-241ENST00000556374 NME1P15531 152 aaKnown RBP5.32□□□□□ -1.56
ATXN3-241ENST00000556374 RPL10P27635 214 aaKnown RBP5.32□□□□□ -1.56
ATXN3-241ENST00000556374 ARL4AP40617 200 aa5.32□□□□□ -1.56
ATXN3-241ENST00000556374 NUCB2P80303 420 aa5.32□□□□□ -1.56
ATXN3-241ENST00000556374 CHRNA2Q15822 529 aa5.32□□□□□ -1.56
ATXN3-241ENST00000556374 GLIPR1L2Q4G1C9 344 aa5.32□□□□□ -1.56
ATXN3-241ENST00000556374 ANKRD39Q53RE8 183 aa5.32□□□□□ -1.56
ATXN3-241ENST00000556374 PTF1AQ7RTS3 328 aa5.32□□□□□ -1.56
ATXN3-241ENST00000556374 SIGLEC10Q96LC7 697 aa5.32□□□□□ -1.56
ATXN3-241ENST00000556374 NAP1L5Q96NT1 182 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-241ENST00000556374 GRPEL1Q9HAV7 217 aa5.32□□□□□ -1.56
ATXN3-241ENST00000556374 POLKQ9UBT6 870 aa5.32□□□□□ -1.56
ATXN3-241ENST00000556374 N4BP2Q86UW6 1770 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-241ENST00000556374 CRB1P82279 1406 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 TTC21BQ7Z4L5 1316 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 FADS2P1A8MWK0 482 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 N4BP3O15049 544 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 INHBBP09529 407 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 POLD1P28340 1107 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 RAB3GAP1Q15042 981 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 BBS9Q3SYG4 887 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 CEP128Q6ZU80 1094 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 RTF1Q92541 710 aaKnown RBP5.31□□□□□ -1.56
ATXN3-241ENST00000556374 HHIPL1Q96JK4 782 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 FOXP3Q9BZS1 431 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 PARD6AQ9NPB6 346 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 CHST7Q9NS84 486 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms