RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 RBM47A0AV96 593 aaKnown RBP6.05□□□□□ -1.44
ATXN3-239ENST00000556315 HMGCRP04035 888 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 F13BP05160 661 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 POLR3DP05423 398 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-239ENST00000556315 ESRRAP11474 423 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-239ENST00000556315 TCP10Q12799 353 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 CPSF6Q16630 551 aaKnown RBP eCLIP6.05□□□□□ -1.44
ATXN3-239ENST00000556315 MSMPQ1L6U9 139 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 EPHA10Q5JZY3 1008 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 BEND3Q5T5X7 828 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 PEAR1Q5VY43 1037 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-239ENST00000556315 GADL1Q6ZQY3 521 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 C12orf50Q8NA57 414 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-239ENST00000556315 GIPC2Q8TF65 315 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 FRMD6Q96NE9 622 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 GUCD1Q96NT3 240 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 CYP4F12Q9HCS2 524 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 NPHS2Q9NP85 383 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 C9orf78Q9NZ63 289 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-239ENST00000556315 GJD2Q9UKL4 321 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 AFG3L2Q9Y4W6 797 aa6.05□□□□□ -1.44
ATXN3-239ENST00000556315 RPAP1Q9BWH6 1393 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-239ENST00000556315 GRM8O00222 908 aa6.04□□□□□ -1.44
ATXN3-239ENST00000556315 GCLCP48506 637 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-239ENST00000556315 FAM110CQ1W6H9 321 aa6.04□□□□□ -1.44
ATXN3-239ENST00000556315 EXOSC6Q5RKV6 272 aaKnown RBP6.04□□□□□ -1.44
ATXN3-239ENST00000556315 CDC42EP5Q6NZY7 148 aa6.04□□□□□ -1.44
ATXN3-239ENST00000556315 SCYL3Q8IZE3 742 aa6.04□□□□□ -1.44
ATXN3-239ENST00000556315 ANKRD13CQ8N6S4 541 aa6.04□□□□□ -1.44
ATXN3-239ENST00000556315 GIMAP7Q8NHV1 300 aa6.04□□□□□ -1.44
ATXN3-239ENST00000556315 WDR66Q8TBY9 1149 aa6.04□□□□□ -1.44
ATXN3-239ENST00000556315 PUS3Q9BZE2 481 aaKnown RBP6.04□□□□□ -1.44
ATXN3-239ENST00000556315 NRSN2Q9GZP1 204 aa6.04□□□□□ -1.44
ATXN3-239ENST00000556315 USP40Q9NVE5 1235 aa6.04□□□□□ -1.44
ATXN3-239ENST00000556315 RNF114Q9Y508 228 aa6.04□□□□□ -1.44
ATXN3-239ENST00000556315 LRRFIP2Q9Y608 721 aaKnown RBP6.04□□□□□ -1.44
ATXN3-239ENST00000556315 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 GIPC1O14908 333 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 EIF4EBP3O60516 100 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-239ENST00000556315 CTNND1O60716 968 aaKnown RBP6.03□□□□□ -1.44
ATXN3-239ENST00000556315 GADD45BO75293 160 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-239ENST00000556315 PDE8BO95263 885 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 COL6A1P12109 1028 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 FOSL1P15407 271 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 ZEB1P37275 1124 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-239ENST00000556315 PABPC4Q13310 644 aaKnown RBP eCLIP6.03□□□□□ -1.44
ATXN3-239ENST00000556315 METTL24Q5JXM2 366 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 KIAA0319Q5VV43 1072 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 ZFPM1Q8IX07 1006 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 EZH1Q92800 747 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-239ENST00000556315 TSR2Q969E8 191 aaKnown RBP6.03□□□□□ -1.44
ATXN3-239ENST00000556315 FAM161BQ96MY7 647 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 CDX2Q99626 313 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-239ENST00000556315 LBHD1Q9BQE6 289 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-239ENST00000556315 USP26Q9BXU7 913 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 LATS2Q9NRM7 1088 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 PPP4R2Q9NY27 417 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 AGTPBP1Q9UPW5 1226 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 DAGLAQ9Y4D2 1042 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 ZNF646O15015 1829 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-239ENST00000556315 CUL9Q8IWT3 2517 aa6.03□□□□□ -1.44
ATXN3-239ENST00000556315 COL6A3P12111 3177 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 FAM95CA0A1B0GW59 222 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 A0A1W2PP55 124 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 TRIM75PA6NK02 468 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 F6X3S4 739 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 ENTPD3O75355 529 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 VAMP4O75379 141 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 ALDH1L1O75891 902 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 PRNPP04156 253 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 IFIT1P09914 478 aaKnown RBP6.02□□□□□ -1.45
ATXN3-239ENST00000556315 XRCC5P13010 732 aaKnown RBP6.02□□□□□ -1.45
ATXN3-239ENST00000556315 DRD2P14416 443 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 ZNF16P17020 682 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-239ENST00000556315 GNA15P30679 374 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 SOX4Q06945 474 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-239ENST00000556315 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.02□□□□□ -1.45
ATXN3-239ENST00000556315 MAP3K21Q5TCX8 1036 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 CDPF1Q6NVV7 123 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 SHISA5Q8N114 240 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 C2CD4AQ8NCU7 369 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-239ENST00000556315 MAFAQ8NHW3 353 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-239ENST00000556315 ASAP3Q8TDY4 903 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 EPS8L3Q8TE67 593 aaKnown RBP6.02□□□□□ -1.45
ATXN3-239ENST00000556315 DUSP9Q99956 384 aaKnown RBP6.02□□□□□ -1.45
ATXN3-239ENST00000556315 IDI2Q9BXS1 227 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 OSBPL1AQ9BXW6 950 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 EHD4Q9H223 541 aa6.02□□□□□ -1.45
ATXN3-239ENST00000556315 PFASO15067 1338 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 KIF16BQ96L93 1317 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 CYP2B6P20813 491 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 FGFR2P21802 821 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 RGS3P49796 1198 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 PSMD2Q13200 908 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 LRRC26Q2I0M4 334 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 LRRC24Q50LG9 513 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 TREML2Q5T2D2 321 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 PAOXQ6QHF9 649 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 NFXL1Q6ZNB6 911 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 ABI1Q8IZP0 508 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms