RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SEMA3FQ13275 785 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 ANKRD1Q15327 319 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 DGKDQ16760 1214 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 C8orf34Q49A92 452 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 CELF3Q5SZQ8 465 aaKnown RBP13.21□□□□□ -0.29
SLIRP-205ENST00000556310 MYSM1Q5VVJ2 828 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 NLRX1Q86UT6 975 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 TRIM22Q8IYM9 498 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 GPRASP2Q96D09 838 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 SLC26A6Q9BXS9 759 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 ANO3Q9BYT9 981 aa13.21□□□□□ -0.29
SLIRP-205ENST00000556310 CPLX1O14810 134 aa13.2□□□□□ -0.3
SLIRP-205ENST00000556310 ITGB8P26012 769 aa13.2□□□□□ -0.3
SLIRP-205ENST00000556310 NEDD9Q14511 834 aa13.2□□□□□ -0.3
SLIRP-205ENST00000556310 NFRKBQ6P4R8 1299 aa13.2□□□□□ -0.3
SLIRP-205ENST00000556310 CPLX2Q6PUV4 134 aaKnown RBP13.2□□□□□ -0.3
SLIRP-205ENST00000556310 TDHQ8IZJ6 230 aa13.2□□□□□ -0.3
SLIRP-205ENST00000556310 CCDC148Q8NFR7 591 aa13.2□□□□□ -0.3
SLIRP-205ENST00000556310 BADQ92934 168 aa13.2□□□□□ -0.3
SLIRP-205ENST00000556310 CDHR1Q96JP9 859 aa13.2□□□□□ -0.3
SLIRP-205ENST00000556310 SPATA33Q96N06 139 aa13.2□□□□□ -0.3
SLIRP-205ENST00000556310 ZMYND12Q9H0C1 365 aa13.2□□□□□ -0.3
SLIRP-205ENST00000556310 RTEL1Q9NZ71 1219 aa13.2□□□□□ -0.3
SLIRP-205ENST00000556310 UBIAD1Q9Y5Z9 338 aa13.2□□□□□ -0.3
SLIRP-205ENST00000556310 B4GALT4O60513 344 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 PPFIA3O75145 1194 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 F2P00734 622 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 TIMP1P01033 207 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 ITGB5P18084 799 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 GNA11P29992 359 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 SREBF1P36956 1147 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 FXR1P51114 621 aaKnown RBP eCLIP13.19□□□□□ -0.3
SLIRP-205ENST00000556310 AK2P54819 239 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 PTPN11Q06124 597 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-205ENST00000556310 STK3Q13188 491 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 NBPF20Q3BBV1 942 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 HSDL1Q3SXM5 330 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 FAM47CQ5HY64 1035 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 MCTP2Q6DN12 878 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 METTL7BQ6UX53 244 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 REXO1Q8N1G1 1221 aaKnown RBP13.19□□□□□ -0.3
SLIRP-205ENST00000556310 KAT2BQ92831 832 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 SENP7Q9BQF6 1050 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 KATNAL1Q9BW62 490 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 MLXIPQ9HAP2 919 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 C6orf50Q9HD87 102 aa13.19□□□□□ -0.3
SLIRP-205ENST00000556310 SORBS3O60504 671 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 PFKFB2O60825 505 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 PPFIA4O75335 1185 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 CDKL5O76039 1030 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 DEXIO95424 95 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 SUPT20HL2P0C7V6 817 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 ZNF286BP0CG31 522 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 FPGSQ05932 587 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 SSRP1Q08945 709 aaKnown RBP13.18□□□□□ -0.3
SLIRP-205ENST00000556310 SCRN1Q12765 414 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 MTMR1Q13613 665 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 SESTD1Q86VW0 696 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 FAM177A1Q8N128 213 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-205ENST00000556310 GIMAP8Q8ND71 665 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-205ENST00000556310 BICD2Q8TD16 824 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 PGBD1Q96JS3 809 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 TMEM121BQ9BXQ6 578 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-205ENST00000556310 TRPV6Q9H1D0 765 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 SLKQ9H2G2 1235 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-205ENST00000556310 HIPK3Q9H422 1215 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 JADE2Q9NQC1 790 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 SH3GLB2Q9NR46 395 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 TMEM260Q9NX78 707 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 VPS54Q9P1Q0 977 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
SLIRP-205ENST00000556310 STK36Q9NRP7 1315 aa13.17□□□□□ -0.3
SLIRP-205ENST00000556310 HAS3O00219 553 aa13.17□□□□□ -0.3
SLIRP-205ENST00000556310 NOP56O00567 594 aaKnown RBP13.17□□□□□ -0.3
SLIRP-205ENST00000556310 MAFGO15525 162 aa13.17□□□□□ -0.3
SLIRP-205ENST00000556310 KCNA2P16389 499 aa13.17□□□□□ -0.3
SLIRP-205ENST00000556310 PSEN2P49810 448 aa13.17□□□□□ -0.3
SLIRP-205ENST00000556310 JAKMIP3Q5VZ66 844 aa13.17□□□□□ -0.3
SLIRP-205ENST00000556310 MFSD5Q6N075 450 aa13.17□□□□□ -0.3
SLIRP-205ENST00000556310 CYFIP1Q7L576 1253 aa13.17□□□□□ -0.3
SLIRP-205ENST00000556310 MXRA8Q9BRK3 442 aa13.17□□□□□ -0.3
SLIRP-205ENST00000556310 NOC4LQ9BVI4 516 aaKnown RBP13.17□□□□□ -0.3
SLIRP-205ENST00000556310 PPP1R12CQ9BZL4 782 aa13.17□□□□□ -0.3
SLIRP-205ENST00000556310 TRMT13Q9NUP7 481 aaKnown RBP13.17□□□□□ -0.3
SLIRP-205ENST00000556310 LAMA2P24043 3122 aaKnown RBP13.17□□□□□ -0.3
SLIRP-205ENST00000556310 NEK4P51957 841 aa13.16□□□□□ -0.3
SLIRP-205ENST00000556310 ARHGAP4P98171 946 aa13.16□□□□□ -0.3
SLIRP-205ENST00000556310 PPIGQ13427 754 aaKnown RBP eCLIP13.16□□□□□ -0.3
SLIRP-205ENST00000556310 MFSD10Q14728 455 aa13.16□□□□□ -0.3
SLIRP-205ENST00000556310 KIAA0753Q2KHM9 967 aa13.16□□□□□ -0.3
SLIRP-205ENST00000556310 LRIT3Q3SXY7 679 aa13.16□□□□□ -0.3
SLIRP-205ENST00000556310 CEP55Q53EZ4 464 aa13.16□□□□□ -0.3
SLIRP-205ENST00000556310 CRYGNQ8WXF5 182 aa13.16□□□□□ -0.3
SLIRP-205ENST00000556310 GPR20Q99678 358 aa13.16□□□□□ -0.3
SLIRP-205ENST00000556310 BCAS3Q9H6U6 928 aa13.16□□□□□ -0.3
SLIRP-205ENST00000556310 TRIP12Q14669 1992 aaPredicted RBP13.16□□□□□ -0.3
SLIRP-205ENST00000556310 SZT2Q5T011 3432 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 ADAMTS3O15072 1205 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 ATP9AO75110 1047 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 LGALS2P05162 132 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms