RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 ANKRD20A12PQ8NF67 263 aa8.21□□□□□ -1.09
PCNX1-211ENST00000556272 NUP133Q8WUM0 1156 aa8.21□□□□□ -1.09
PCNX1-211ENST00000556272 GOLGA1Q92805 767 aa8.21□□□□□ -1.09
PCNX1-211ENST00000556272 UBXN6Q9BZV1 441 aa8.21□□□□□ -1.09
PCNX1-211ENST00000556272 SEC31BQ9NQW1 1179 aa8.21□□□□□ -1.09
PCNX1-211ENST00000556272 RWDD2AQ9UIY3 292 aa8.21□□□□□ -1.09
PCNX1-211ENST00000556272 TRPC5Q9UL62 973 aaPredicted RBP8.21□□□□□ -1.09
PCNX1-211ENST00000556272 BAZ2AQ9UIF9 1905 aaKnown RBP8.21□□□□□ -1.09
PCNX1-211ENST00000556272 MFAP3LO75121 409 aa8.21□□□□□ -1.1
PCNX1-211ENST00000556272 GNG11P61952 73 aa8.21□□□□□ -1.1
PCNX1-211ENST00000556272 PPP2R3AQ06190 1150 aa8.21□□□□□ -1.1
PCNX1-211ENST00000556272 GALNT17Q6IS24 598 aa8.21□□□□□ -1.1
PCNX1-211ENST00000556272 CTCFLQ8NI51 663 aaPredicted RBP8.21□□□□□ -1.1
PCNX1-211ENST00000556272 TRMT2BQ96GJ1 504 aaKnown RBP8.21□□□□□ -1.1
PCNX1-211ENST00000556272 GPR101Q96P66 508 aaPredicted RBP8.21□□□□□ -1.1
PCNX1-211ENST00000556272 MED15Q96RN5 788 aa8.21□□□□□ -1.1
PCNX1-211ENST00000556272 SAP130Q9H0E3 1048 aa8.21□□□□□ -1.1
PCNX1-211ENST00000556272 INCENPQ9NQS7 918 aa8.21□□□□□ -1.1
PCNX1-211ENST00000556272 KIF5BP33176 963 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 EML3Q32P44 896 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 SLC10A5Q5PT55 438 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 TEX35Q5T0J7 233 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 ZNF771Q7L3S4 317 aaPredicted RBP8.2□□□□□ -1.1
PCNX1-211ENST00000556272 TMTC1Q8IUR5 882 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 CPXCR1Q8N123 301 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 ANKS1AQ92625 1134 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 SYTL4Q96C24 671 aaPredicted RBP8.2□□□□□ -1.1
PCNX1-211ENST00000556272 DMRTB1Q96MA1 342 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 HINFPQ9BQA5 517 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 ZKSCAN3Q9BRR0 538 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 TMEM106CQ9BVX2 250 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 MAGEF1Q9HAY2 307 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.2□□□□□ -1.1
PCNX1-211ENST00000556272 FEZ2Q9UHY8 353 aaPredicted RBP8.2□□□□□ -1.1
PCNX1-211ENST00000556272 V9GYY5 206 aaPredicted RBP8.2□□□□□ -1.1
PCNX1-211ENST00000556272 ROBO3Q96MS0 1386 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 CCDC151A5D8V7 595 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 A6NCN8 305 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 UBE2Q2LH0YL09 131 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 LAD1O00515 517 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 KIF5CO60282 957 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 PPP1R2P41236 205 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 HALP42357 657 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 NPY5RQ15761 445 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 PFKFB3Q16875 520 aaPredicted RBP8.2□□□□□ -1.1
PCNX1-211ENST00000556272 SULF1Q8IWU6 871 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 IGSF22Q8N9C0 903 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 DAGLBQ8NCG7 672 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 SLAIN1Q8ND83 568 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 DHX58Q96C10 678 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 SMAD5Q99717 465 aaKnown RBP8.2□□□□□ -1.1
PCNX1-211ENST00000556272 CARD6Q9BX69 1037 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 CRNKL1Q9BZJ0 848 aaKnown RBP8.2□□□□□ -1.1
PCNX1-211ENST00000556272 KMT5AQ9NQR1 393 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 SAMSN1Q9NSI8 373 aaKnown RBP8.2□□□□□ -1.1
PCNX1-211ENST00000556272 FAM198AQ9UFP1 575 aa8.2□□□□□ -1.1
PCNX1-211ENST00000556272 NIP7Q9Y221 180 aaKnown RBP eCLIP8.2□□□□□ -1.1
PCNX1-211ENST00000556272 LOC102724428A0A0B4J2F2 783 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 FANCGO15287 622 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 RHOBTB3O94955 611 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 PGRP06401 933 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 SCG2P13521 617 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 TXLNAP40222 546 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 STAT3P40763 770 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 SIK1P57059 783 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 SPECC1Q5M775 1068 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 ZNF658Q5TYW1 1059 aaPredicted RBP8.19□□□□□ -1.1
PCNX1-211ENST00000556272 LVRNQ6Q4G3 990 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 TOGARAM2Q6ZUX3 1019 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 DGKHQ86XP1 1220 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 MIGA1Q8NAN2 632 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 TSEN2Q8NCE0 465 aaKnown RBP8.19□□□□□ -1.1
PCNX1-211ENST00000556272 SKA1Q96BD8 255 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 CUEDC2Q9H467 287 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 VPS54Q9P1Q0 977 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 TNRC6CQ9HCJ0 1690 aaKnown RBP8.19□□□□□ -1.1
PCNX1-211ENST00000556272 MINDY4BA8MYZ0 360 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 MTA2O94776 668 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 RASGRP1O95267 797 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 ATP6V1AP38606 617 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 CASP2P42575 452 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 GNAQP50148 359 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 ORC2Q13416 577 aaPredicted RBP8.19□□□□□ -1.1
PCNX1-211ENST00000556272 KCNB1Q14721 858 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 PDXDC2PQ6P474 469 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 CTR9Q6PD62 1173 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 SRGAP1Q7Z6B7 1085 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 ADGRA1Q86SQ6 560 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 NOC3LQ8WTT2 800 aaKnown RBP8.19□□□□□ -1.1
PCNX1-211ENST00000556272 SHISA4Q96DD7 197 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 IQCDQ96DY2 449 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 ANKRD2Q9GZV1 360 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 CDH19Q9H159 772 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 SAGE1Q9NXZ1 904 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 EFR3BQ9Y2G0 817 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 A0A087X0B3 334 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 A0A1W2PQC6 194 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 H7C1D1 291 aa8.19□□□□□ -1.1
PCNX1-211ENST00000556272 EIF1AXP47813 144 aaKnown RBP8.19□□□□□ -1.1
PCNX1-211ENST00000556272 ADKP55263 362 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms