RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 GPR20Q99678 358 aa17.33■□□□□ 0.36
ACTN1-217ENST00000556203 KATNAL1Q9BW62 490 aa17.33■□□□□ 0.36
ACTN1-217ENST00000556203 ORC3Q9UBD5 711 aaPredicted RBP17.33■□□□□ 0.36
ACTN1-217ENST00000556203 PCDHA4Q9UN74 947 aa17.33■□□□□ 0.36
ACTN1-217ENST00000556203 LIMCH1Q9UPQ0 1083 aa17.33■□□□□ 0.36
ACTN1-217ENST00000556203 TELO2Q9Y4R8 837 aa17.33■□□□□ 0.36
ACTN1-217ENST00000556203 F2P00734 622 aa17.32■□□□□ 0.36
ACTN1-217ENST00000556203 TIMP1P01033 207 aa17.32■□□□□ 0.36
ACTN1-217ENST00000556203 PSEN2P49810 448 aa17.32■□□□□ 0.36
ACTN1-217ENST00000556203 ST3GAL1Q11201 340 aa17.32■□□□□ 0.36
ACTN1-217ENST00000556203 MFSD10Q14728 455 aa17.32■□□□□ 0.36
ACTN1-217ENST00000556203 FAM177A1Q8N128 213 aaPredicted RBP17.32■□□□□ 0.36
ACTN1-217ENST00000556203 CRYGNQ8WXF5 182 aa17.32■□□□□ 0.36
ACTN1-217ENST00000556203 ALG1Q9BT22 464 aa17.32■□□□□ 0.36
ACTN1-217ENST00000556203 PPP1R12CQ9BZL4 782 aa17.32■□□□□ 0.36
ACTN1-217ENST00000556203 KCNH7Q9NS40 1196 aa17.32■□□□□ 0.36
ACTN1-217ENST00000556203 CEP290O15078 2479 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 FAM86B1E9PN63 330 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 MEIS1O00470 390 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 LGALS2P05162 132 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 CYP3A4P08684 503 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 FAM86B2P0C5J1 330 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 SUPT20HL2P0C7V6 817 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 ARP10275 920 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 PTPN11Q06124 597 aaPredicted RBP17.31■□□□□ 0.36
ACTN1-217ENST00000556203 RABEP1Q15276 862 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 KIAA0753Q2KHM9 967 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 BLIDQ8IZY5 108 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 DAGLBQ8NCG7 672 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 NSUN7Q8NE18 718 aaKnown RBP17.31■□□□□ 0.36
ACTN1-217ENST00000556203 WASF1Q92558 559 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 C16orf70Q9BSU1 422 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 KCNJ14Q9UNX9 436 aa17.31■□□□□ 0.36
ACTN1-217ENST00000556203 A0A1W2PPC1 479 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 HAS3O00219 553 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 JAK2O60674 1132 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 FDPSP14324 419 aaKnown RBP17.3■□□□□ 0.36
ACTN1-217ENST00000556203 XBP1P17861 261 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 NPY5RQ15761 445 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 UTP14CQ5TAP6 766 aaKnown RBP17.3■□□□□ 0.36
ACTN1-217ENST00000556203 GALNT17Q6IS24 598 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 NIPA1Q7RTP0 329 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 SESTD1Q86VW0 696 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 PLA2G4DQ86XP0 818 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 C7orf31Q8N865 590 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 SDF4Q9BRK5 362 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 PHF20Q9BVI0 1012 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 HIPK3Q9H422 1215 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 AGO4Q9HCK5 861 aaKnown RBP17.3■□□□□ 0.36
ACTN1-217ENST00000556203 JPH1Q9HDC5 661 aaPredicted RBP17.3■□□□□ 0.36
ACTN1-217ENST00000556203 HDAC6Q9UBN7 1215 aa17.3■□□□□ 0.36
ACTN1-217ENST00000556203 SCN10AQ9Y5Y9 1956 aa17.29■□□□□ 0.36
ACTN1-217ENST00000556203 M0R2N6 131 aa17.29■□□□□ 0.36
ACTN1-217ENST00000556203 CYP2C9P11712 490 aa17.29■□□□□ 0.36
ACTN1-217ENST00000556203 FPGSQ05932 587 aa17.29■□□□□ 0.36
ACTN1-217ENST00000556203 GDF6Q6KF10 455 aaPredicted RBP17.29■□□□□ 0.36
ACTN1-217ENST00000556203 TRIM50Q86XT4 487 aa17.29■□□□□ 0.36
ACTN1-217ENST00000556203 CCDC83Q8IWF9 413 aa17.29■□□□□ 0.36
ACTN1-217ENST00000556203 TDHQ8IZJ6 230 aa17.29■□□□□ 0.36
ACTN1-217ENST00000556203 GJB4Q9NTQ9 266 aa17.29■□□□□ 0.36
ACTN1-217ENST00000556203 NOD1Q9Y239 953 aa17.29■□□□□ 0.36
ACTN1-217ENST00000556203 NFASCO94856 1347 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 UMODL1Q5DID0 1318 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 DNAH12Q6ZR08 3092 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 IGLV3-22A0A075B6J6 115 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 H3BRB1 525 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 CIITAP33076 1130 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 CYP2C18P33260 490 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 SETQ01105 290 aaPredicted RBP17.28■□□□□ 0.36
ACTN1-217ENST00000556203 ITGB3BPQ13352 177 aaPredicted RBP17.28■□□□□ 0.36
ACTN1-217ENST00000556203 PTGISQ16647 500 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 PRR16Q569H4 304 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 MFSD5Q6N075 450 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 TBCKQ8TEA7 893 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 SEPT1Q8WYJ6 367 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 ZSCAN31Q96LW9 406 aaPredicted RBP17.28■□□□□ 0.36
ACTN1-217ENST00000556203 TBC1D32Q96NH3 1257 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 NOC4LQ9BVI4 516 aaKnown RBP17.28■□□□□ 0.36
ACTN1-217ENST00000556203 TUT1Q9H6E5 874 aaKnown RBP17.28■□□□□ 0.36
ACTN1-217ENST00000556203 SLC9A2Q9UBY0 812 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 GTF2IRD1Q9UHL9 959 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 LTBP2Q14767 1821 aa17.28■□□□□ 0.36
ACTN1-217ENST00000556203 GSTTP1A0A1W2PQM5 241 aa17.27■□□□□ 0.36
ACTN1-217ENST00000556203 EDIL3O43854 480 aa17.27■□□□□ 0.36
ACTN1-217ENST00000556203 ST18O60284 1047 aa17.27■□□□□ 0.36
ACTN1-217ENST00000556203 TCF7P36402 384 aaPredicted RBP17.27■□□□□ 0.36
ACTN1-217ENST00000556203 EPHB4P54760 987 aa17.27■□□□□ 0.36
ACTN1-217ENST00000556203 TMEM199Q8N511 208 aa17.27■□□□□ 0.36
ACTN1-217ENST00000556203 UIMC1Q96RL1 719 aa17.27■□□□□ 0.36
ACTN1-217ENST00000556203 SH2B1Q9NRF2 756 aaPredicted RBP17.27■□□□□ 0.36
ACTN1-217ENST00000556203 ZNF215Q9UL58 517 aaPredicted RBP17.27■□□□□ 0.36
ACTN1-217ENST00000556203 DDX39AO00148 427 aaKnown RBP17.26■□□□□ 0.35
ACTN1-217ENST00000556203 CSF2RAP15509 400 aa17.26■□□□□ 0.35
ACTN1-217ENST00000556203 USP11P51784 963 aa17.26■□□□□ 0.35
ACTN1-217ENST00000556203 FOSBP53539 338 aa17.26■□□□□ 0.35
ACTN1-217ENST00000556203 CCL23P55773 120 aa17.26■□□□□ 0.35
ACTN1-217ENST00000556203 PPIGQ13427 754 aaKnown RBP eCLIP17.26■□□□□ 0.35
ACTN1-217ENST00000556203 NONOQ15233 471 aaKnown RBP eCLIP17.26■□□□□ 0.35
ACTN1-217ENST00000556203 C9orf50Q5SZB4 431 aa17.26■□□□□ 0.35
ACTN1-217ENST00000556203 KRT25Q7Z3Z0 450 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms