RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 AMNQ9BXJ7 453 aa9.36□□□□□ -0.91
ATXN3-235ENST00000556082 GTPBP4Q9BZE4 634 aaKnown RBP9.36□□□□□ -0.91
ATXN3-235ENST00000556082 HSD3B7Q9H2F3 369 aa9.36□□□□□ -0.91
ATXN3-235ENST00000556082 ARHGEF10LQ9HCE6 1279 aa9.36□□□□□ -0.91
ATXN3-235ENST00000556082 MYOZ2Q9NPC6 264 aa9.36□□□□□ -0.91
ATXN3-235ENST00000556082 IMPACTQ9P2X3 320 aa9.36□□□□□ -0.91
ATXN3-235ENST00000556082 BIN2Q9UBW5 565 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-235ENST00000556082 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.36□□□□□ -0.91
ATXN3-235ENST00000556082 BAZ2BQ9UIF8 2168 aaKnown RBP9.36□□□□□ -0.91
ATXN3-235ENST00000556082 CYP3A7-CYP3A51PA0A087WV96 503 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 A0A087WWV3 80 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 A0A1W2PRG0 241 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 CLRN2A0PK11 232 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 ERVH48-1M5A8F1 160 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 EDIL3O43854 480 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 CCNT1O60563 726 aaKnown RBP9.35□□□□□ -0.91
ATXN3-235ENST00000556082 GDF11O95390 407 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 FOSP01100 380 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-235ENST00000556082 CYP3A7P24462 503 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 HOXA7P31268 230 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-235ENST00000556082 SLC16A2P36021 539 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 CAP2P40123 477 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 AP3B2Q13367 1082 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 TNFAIP1Q13829 316 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 LETM2Q2VYF4 491 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 SYDE2Q5VT97 1194 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 JAKMIP3Q5VZ66 844 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 ZNF784Q8NCA9 323 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-235ENST00000556082 BANK1Q8NDB2 785 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 MBOAT7Q96N66 472 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 SH2D4AQ9H788 454 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 DISC1Q9NRI5 854 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 KBTBD4Q9NVX7 518 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 RMND1Q9NWS8 449 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 TMEM260Q9NX78 707 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 ZBTB21Q9ULJ3 1066 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 PCDHA1Q9Y5I3 950 aa9.35□□□□□ -0.91
ATXN3-235ENST00000556082 PIK3CDO00329 1044 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 CBFA2T2O43439 604 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 LILRA1O75019 489 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 ASNSP08243 561 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 ZNF18P17022 549 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 PTGIRP43119 386 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 CTSOP43234 321 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-235ENST00000556082 RELBQ01201 579 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 KCNB1Q14721 858 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 CDC37Q16543 378 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-235ENST00000556082 CALCRLQ16602 461 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 SHROOM1Q2M3G4 852 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-235ENST00000556082 NAALADL2Q58DX5 795 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 RRAGBQ5VZM2 374 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 FBXO11Q86XK2 927 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 CRYGNQ8WXF5 182 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 RAB34Q9BZG1 259 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 TMPRSS4Q9NRS4 437 aa9.34□□□□□ -0.91
ATXN3-235ENST00000556082 PHF20L1A8MW92 1017 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 TMEM232C9JQI7 657 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 MEIS2O14770 477 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 STAT6P42226 847 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 AFMP43652 599 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 GSDMDP57764 484 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 FANCCQ00597 558 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 CUL4BQ13620 913 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 RASA3Q14644 834 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 R3HDM1Q15032 1099 aaKnown RBP9.33□□□□□ -0.92
ATXN3-235ENST00000556082 TMEM266Q2M3C6 531 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 NBPF9Q3BBW0 867 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 SPATA1Q5VX52 437 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 ISM2Q6H9L7 571 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 CNNM4Q6P4Q7 775 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 CCDC186Q7Z3E2 898 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 FAM160B2Q86V87 743 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 DRC7Q8IY82 874 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 GRAMD1CQ8IYS0 662 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 RNF217Q8TC41 542 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 KIAA1524Q8TCG1 905 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 CHURC1Q8WUH1 139 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 AGBL1Q96MI9 1066 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 TEPSINQ96N21 525 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 INSM2Q96T92 566 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-235ENST00000556082 C7orf25Q9BPX7 421 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 TMEM39BQ9GZU3 492 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 DEFB129Q9H1M3 183 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 VCPKMTQ9H867 229 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 VEZTQ9HBM0 779 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 POLMQ9NP87 494 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-235ENST00000556082 SPTLC3Q9NUV7 552 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 FANCLQ9NW38 375 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 PRR12Q9ULL5 1215 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 FER1L6Q2WGJ9 1857 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 MYH8P13535 1937 aa9.33□□□□□ -0.92
ATXN3-235ENST00000556082 TBX3O15119 743 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 OFD1O75665 1012 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 RPN1P04843 607 aaKnown RBP9.32□□□□□ -0.92
ATXN3-235ENST00000556082 CYP3A4P08684 503 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 PTGS1P23219 599 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 CIITAP33076 1130 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 STAT2P52630 851 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 AMPD3Q01432 767 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 KARSQ15046 597 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms