RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	TNNC1	P63316	161 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	ABCB5	Q2M3G0	1257 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	C4orf32	Q8N8J7	132 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	RPGRIP1	Q96KN7	1286 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	TSGA10	Q9BZW7	698 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	MAGEF1	Q9HAY2	307 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	MAD2L2	Q9UI95	211 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	CHD4	Q14839	1912 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	PSMD14	O00487	310 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	ANKRD40	Q6AI12	368 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	DAAM2	Q86T65	1068 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	IRF2BP1	Q8IU81	584 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	SUPT20H	Q8NEM7	779 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	TBC1D16	Q8TBP0	767 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	RASAL2	Q9UJF2	1139 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	DISP2	A7MBM2	1401 aa		13.48	□□□□□ -0.25
TMPO-212	ENST00000556029	FAM13A	O94988	1023 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	CCDC172	P0C7W6	258 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	SRGN	P10124	158 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	FCER1A	P12319	257 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	FECH	P22830	423 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	UBE2S	Q16763	222 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	PRR16	Q569H4	304 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	NAALADL2	Q58DX5	795 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	RC3H1	Q5TC82	1133 aa	Known RBP	13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	DDX60	Q8IY21	1712 aa	Known RBP	13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	ECM29	Q5VYK3	1845 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	STXBP3	O00186	592 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	ADRA2B	P18089	450 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	VPS41	P49754	854 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	USP14	P54578	494 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	CCDC170	Q8IYT3	715 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	CEP95	Q96GE4	821 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	IFIH1	Q9BYX4	1025 aa	Known RBP	13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	UBXN6	Q9BZV1	441 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	COA1	Q9GZY4	146 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	MED4	Q9NPJ6	270 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	MYH2	Q9UKX2	1941 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	PPM1F	P49593	454 aa	Predicted RBP	13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	HERVK_113	P62684	666 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	CYP4A11	Q02928	519 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	STK4	Q13043	487 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	PPP2R5D	Q14738	602 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	KBTBD4	Q9NVX7	518 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	DUOX1	Q9NRD9	1551 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	USP17L5	A8MUK1	530 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	KCTD16	Q68DU8	428 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	TTI2	Q6NXR4	508 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	TRAPPC11	Q7Z392	1133 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	TBCK	Q8TEA7	893 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	HPS3	Q969F9	1004 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	TRIM9	Q9C026	710 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	FAM204A	Q9H8W3	233 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	STIM2	Q9P246	746 aa		13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	REXO2	Q9Y3B8	237 aa	Known RBP	13.47	□□□□□ -0.25
TMPO-212	ENST00000556029	LRRC27	Q9C0I9	530 aa		13.46	□□□□□ -0.25
TMPO-212	ENST00000556029	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.46	□□□□□ -0.25
TMPO-212	ENST00000556029	SHANK3	Q9BYB0	1731 aa		13.46	□□□□□ -0.25
TMPO-212	ENST00000556029	SLIT2	O94813	1529 aa		13.46	□□□□□ -0.25
TMPO-212	ENST00000556029	LMBR1	Q8WVP7	490 aa		13.46	□□□□□ -0.25
TMPO-212	ENST00000556029	MTRF1L	Q9UGC7	380 aa	Known RBP	13.46	□□□□□ -0.25
TMPO-212	ENST00000556029		E7EVH7	732 aa		13.46	□□□□□ -0.26
TMPO-212	ENST00000556029	PRPH	P41219	470 aa		13.46	□□□□□ -0.26
TMPO-212	ENST00000556029	CLNS1A	P54105	237 aa	Known RBP	13.46	□□□□□ -0.26
TMPO-212	ENST00000556029	KRT71	Q3SY84	523 aa		13.46	□□□□□ -0.26
TMPO-212	ENST00000556029	VSIG1	Q86XK7	387 aa		13.46	□□□□□ -0.26
TMPO-212	ENST00000556029	ANKRD36C	Q5JPF3	1778 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	LRP5	O75197	1615 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	ATP2A1	O14983	1001 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	CRK	P46108	304 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	RRAGA	Q7L523	313 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	ZNF507	Q8TCN5	953 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	ITGB4	P16144	1822 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	MYH6	P13533	1939 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	EIF3CL	B5ME19	914 aa	Known RBP	13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	KLRC4	O43908	158 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	RNF40	O75150	1001 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	TTLL1	O95922	423 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	C2orf54	Q08AI8	447 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	ARHGAP27	Q6ZUM4	889 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	TRIM58	Q8NG06	486 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	MICAL1	Q8TDZ2	1067 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	EIF3C	Q99613	913 aa	Known RBP	13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	PSD3	Q9NYI0	1048 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	GINS2	Q9Y248	185 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	STK38L	Q9Y2H1	464 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	ZNF185	O15231	689 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	ALAS1	P13196	640 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	AMPD2	Q01433	879 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	SETDB1	Q15047	1291 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	SLC9C1	Q4G0N8	1177 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	SLC27A3	Q5K4L6	730 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	WDR59	Q6PJI9	974 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	PPP1R21	Q6ZMI0	780 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	BCAS4	Q8TDM0	211 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	LACRT	Q9GZZ8	138 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	PICK1	Q9NRD5	415 aa		13.45	□□□□□ -0.26
TMPO-212	ENST00000556029	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms