RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 METAP2P50579 478 aaKnown RBP eCLIP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 AK2P54819 239 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 SLC20A2Q08357 652 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 RBL2Q08999 1139 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 FAAP100Q0VG06 881 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 STXBP2Q15833 593 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 FSCN1Q16658 493 aaKnown RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 KLHL40Q2TBA0 621 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 DNTTIP2Q5QJE6 756 aaKnown RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 MYSM1Q5VVJ2 828 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 USP17L6PQ6QN14 398 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 NFXL1Q6ZNB6 911 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 NIPA1Q7RTP0 329 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 RAB11FIP4Q86YS3 637 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 FAM126BQ8IXS8 530 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 PPTC7Q8NI37 304 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 SCFD2Q8WU76 684 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 GPKOWQ92917 476 aaPredicted RBP eCLIP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 TNFRSF25Q93038 417 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 LENG9Q96B70 501 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 TRIM43Q96BQ3 446 aaPredicted RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 HTATIP2Q9BUP3 242 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 WDR11Q9BZH6 1224 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 OCEL1Q9H607 264 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 PDLIM7Q9NR12 457 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 PDRG1Q9NUG6 133 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 RYDENQ9NUL5 291 aaKnown RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 CGNQ9P2M7 1197 aaKnown RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 METRNQ9UJH8 293 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 TBX21Q9UL17 535 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 ARID2Q68CP9 1835 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 LAMA3Q16787 3333 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 SZT2Q5T011 3432 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 A0A1W2PPC1 479 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 hCG_1642624A0A1W2PR95 340 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 CABYRO75952 493 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 MMP3P08254 477 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 ITGB5P18084 799 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 CIITAP33076 1130 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 RTP1P59025 263 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 PDE4DQ08499 809 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 ME3Q16798 604 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 CELF3Q5SZQ8 465 aaKnown RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 ANO1Q5XXA6 986 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 RNF180Q86T96 592 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 HOMER1Q86YM7 354 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 PDCD7Q8N8D1 485 aaKnown RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 SMARCC2Q8TAQ2 1214 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 COPS5Q92905 334 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 GTF3C6Q969F1 213 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 PRIMPOLQ96LW4 560 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 SENP7Q9BQF6 1050 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 C16orf70Q9BSU1 422 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 UPF3BQ9BZI7 483 aaKnown RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 BCAS3Q9H6U6 928 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 PSTPIP2Q9H939 334 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 NCOA5Q9HCD5 579 aaKnown RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 RBM27Q9P2N5 1060 aaKnown RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 TELO2Q9Y4R8 837 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 V9GY48 417 aaPredicted RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 KIAA0100Q14667 2235 aaKnown RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 GBF1Q92538 1859 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 CYP3A7-CYP3A51PA0A087WV96 503 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 IGKV6D-21A0A0A0MT36 114 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 CCDC196A0A1B0GTZ2 297 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 KBTBD13C9JR72 458 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 ARVCFO00192 962 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 DHX15O43143 795 aaKnown RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 ATG7O95352 703 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 F2P00734 622 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 CFBP00751 764 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 UBA1P22314 1058 aaKnown RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 CYP3A7P24462 503 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 CCND2P30279 289 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 ADAM17P78536 824 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 PTPN11Q06124 597 aaPredicted RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 AP3B2Q13367 1082 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 HIC1Q14526 733 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 UBE2SQ16763 222 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 LY6KQ17RY6 165 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 TRIM60Q495X7 471 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 RASIP1Q5U651 963 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 ARHGEF16Q5VV41 709 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 KCNV1Q6PIU1 500 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 TRAF7Q6Q0C0 670 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 B3GNT9Q6UX72 402 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 PCSK9Q8NBP7 692 aaKnown RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 SNX21Q969T3 373 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 GPRASP2Q96D09 838 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 PHF20Q9BVI0 1012 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 MFRPQ9BY79 579 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 SENP6Q9GZR1 1112 aaPredicted RBP4.47□□□□□ -1.69
LINC00648-202ENST00000555985 JADE2Q9NQC1 790 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 CCDC39Q9UFE4 941 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 PCDHA6Q9UN73 950 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 PCDHA8Q9Y5H6 950 aa4.47□□□□□ -1.69
LINC00648-202ENST00000555985 NFASCO94856 1347 aa4.46□□□□□ -1.69
LINC00648-202ENST00000555985 SCN5AQ14524 2016 aa4.46□□□□□ -1.7
LINC00648-202ENST00000555985 LAMA2P24043 3122 aaKnown RBP4.46□□□□□ -1.7
LINC00648-202ENST00000555985 MYH15Q9Y2K3 1946 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms