RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 TSPY8P0CW00 308 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 KIF5BP33176 963 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 RHBDL3P58872 404 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 TFAP4Q01664 338 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 GUCY1B3Q02153 619 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 PRKCZQ05513 592 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 USP4Q13107 963 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 LRRC41Q15345 812 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 NTRK3Q16288 839 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 FAM47AQ5JRC9 791 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 CCDC183Q5T5S1 534 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 FAM173BQ6P4H8 233 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 ANKRD13AQ8IZ07 590 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 DOCK3Q8IZD9 2030 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 CRACR2BQ8N4Y2 399 aaPredicted RBP7.82□□□□□ -1.16
SLIRP-204ENST00000555890 PIK3R5Q8WYR1 880 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 PHKBQ93100 1093 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 HINFPQ9BQA5 517 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 RNF26Q9BY78 433 aaPredicted RBP7.82□□□□□ -1.16
SLIRP-204ENST00000555890 KAT14Q9H8E8 782 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 ELP3Q9H9T3 547 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 TCP11L1Q9NUJ3 509 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 USP40Q9NVE5 1235 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 ANKFY1Q9P2R3 1169 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 SAP30BPQ9UHR5 308 aaKnown RBP7.82□□□□□ -1.16
SLIRP-204ENST00000555890 FBN3Q75N90 2809 aa7.82□□□□□ -1.16
SLIRP-204ENST00000555890 CHD9Q3L8U1 2897 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 FLT1P17948 1338 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 ZZEF1O43149 2961 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 CCL15-CCL14A0A0B4J2E2 113 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 BTBD19C9JJ37 291 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 M0R2N6 131 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 PRPF3O43395 683 aaKnown RBP7.81□□□□□ -1.16
SLIRP-204ENST00000555890 PPFIA3O75145 1194 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 CDK8P49336 464 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 GNAQP50148 359 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 MMP14P50281 582 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 CCL15Q16663 113 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 NBPF20Q3BBV1 942 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 KRT40Q6A162 431 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 MCTP2Q6DN12 878 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 C16orf86Q6ZW13 317 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 SH3RF1Q7Z6J0 888 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 CERS5Q8N5B7 392 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 ANP32BQ92688 251 aaKnown RBP7.81□□□□□ -1.16
SLIRP-204ENST00000555890 TEPSINQ96N21 525 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 MAP3K14Q99558 947 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 GRPEL1Q9HAV7 217 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 PRDM9Q9NQV7 894 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 TMEM63CQ9P1W3 806 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 RCOR1Q9UKL0 485 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 SPEGQ15772 3267 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 HECTD1Q9ULT8 2610 aa7.81□□□□□ -1.16
SLIRP-204ENST00000555890 DDX60LQ5H9U9 1706 aaKnown RBP7.81□□□□□ -1.16
SLIRP-204ENST00000555890 ITPR3Q14573 2671 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 FRYQ5TBA9 3013 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 CNOT1A5YKK6 2376 aaKnown RBP7.8□□□□□ -1.16
SLIRP-204ENST00000555890 SYCE3A1L190 88 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 HLA-DOAP06340 250 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 COL6A1P12109 1028 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 ELNP15502 786 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 WEE1P30291 646 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 CRKP46108 304 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 IREB2P48200 963 aaKnown RBP7.8□□□□□ -1.16
SLIRP-204ENST00000555890 PLCD1P51178 756 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 RBM5P52756 815 aaKnown RBP eCLIP7.8□□□□□ -1.16
SLIRP-204ENST00000555890 TROAPQ12815 778 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 PICALMQ13492 652 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 STK38Q15208 465 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 SF3A1Q15459 793 aaKnown RBP7.8□□□□□ -1.16
SLIRP-204ENST00000555890 ECM1Q16610 540 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 BPHLQ86WA6 291 aaPredicted RBP7.8□□□□□ -1.16
SLIRP-204ENST00000555890 KIAA0825Q8IV33 1275 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 NEDD1Q8NHV4 660 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 BICD2Q8TD16 824 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 DYNLL2Q96FJ2 89 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 PRMT6Q96LA8 375 aaPredicted RBP7.8□□□□□ -1.16
SLIRP-204ENST00000555890 ZDHHC15Q96MV8 337 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 RTEL1Q9NZ71 1219 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 SWAP70Q9UH65 585 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 OGDHLQ9ULD0 1010 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 PPP2R3BQ9Y5P8 575 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 DNMT3AQ9Y6K1 912 aaPredicted RBP7.8□□□□□ -1.16
SLIRP-204ENST00000555890 MYO9AB2RTY4 2548 aa7.8□□□□□ -1.16
SLIRP-204ENST00000555890 MYO3BQ8WXR4 1341 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 YEATS4O95619 227 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 MMP1P03956 469 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 U2AF2P26368 475 aaKnown RBP eCLIP7.79□□□□□ -1.161e-7■□□□□ 8
SLIRP-204ENST00000555890 GTF2A2P52657 109 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 CEBPZQ03701 1054 aaKnown RBP7.79□□□□□ -1.16
SLIRP-204ENST00000555890 SUPT20HL1Q3ZLR7 823 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 ZNF787Q6DD87 383 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 CDC42EP5Q6NZY7 148 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 TMTC3Q6ZXV5 915 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 KIAA2013Q8IYS2 634 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 KCNG4Q8TDN1 519 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 BADQ92934 168 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 USP28Q96RU2 1077 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 LZTS2Q9BRK4 669 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 DHX36Q9H2U1 1008 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms