RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 NLRX1Q86UT6 975 aa14.62□□□□□ -0.07
HNRNPC-221ENST00000555883 FANCBQ8NB91 859 aa14.62□□□□□ -0.07
HNRNPC-221ENST00000555883 ATXN2LQ8WWM7 1075 aaKnown RBP14.62□□□□□ -0.07
HNRNPC-221ENST00000555883 GPKOWQ92917 476 aaPredicted RBP eCLIP14.62□□□□□ -0.075e-6■■□□□ 13.3
HNRNPC-221ENST00000555883 GPRASP2Q96D09 838 aa14.62□□□□□ -0.07
HNRNPC-221ENST00000555883 GPR20Q99678 358 aa14.62□□□□□ -0.07
HNRNPC-221ENST00000555883 PSTPIP2Q9H939 334 aa14.62□□□□□ -0.07
HNRNPC-221ENST00000555883 SCN5AQ14524 2016 aa14.61□□□□□ -0.07
HNRNPC-221ENST00000555883 GBF1Q92538 1859 aa14.61□□□□□ -0.07
HNRNPC-221ENST00000555883 C17orf102A2RUQ5 167 aa14.61□□□□□ -0.07
HNRNPC-221ENST00000555883 MAFGO15525 162 aa14.61□□□□□ -0.07
HNRNPC-221ENST00000555883 GNAT1P11488 350 aa14.61□□□□□ -0.07
HNRNPC-221ENST00000555883 MYOGP15173 224 aa14.61□□□□□ -0.07
HNRNPC-221ENST00000555883 RCAN1P53805 252 aa14.61□□□□□ -0.07
HNRNPC-221ENST00000555883 TJAP1Q5JTD0 557 aa14.61□□□□□ -0.07
HNRNPC-221ENST00000555883 RBM28Q9NW13 759 aaKnown RBP14.61□□□□□ -0.07
HNRNPC-221ENST00000555883 ZNF215Q9UL58 517 aaPredicted RBP14.61□□□□□ -0.07
HNRNPC-221ENST00000555883 EXOSC10Q01780 885 aaKnown RBP14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 COL9A3Q14050 684 aaPredicted RBP14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 IKBKEQ14164 716 aa14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 HIC1Q14526 733 aa14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 KRT32Q14532 448 aa14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 ZNF618Q5T7W0 954 aa14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 APOA5Q6Q788 366 aa14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 SYNE3Q6ZMZ3 975 aa14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 CYFIP1Q7L576 1253 aa14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 PIBF1Q8WXW3 757 aa14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 WNT8BQ93098 351 aa14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 NEK1Q96PY6 1258 aa14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 THEGQ9P2T0 379 aa14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 REV3LO60673 3130 aa14.6□□□□□ -0.07
HNRNPC-221ENST00000555883 BAZ2BQ9UIF8 2168 aaKnown RBP14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 hCG_1984214I3L0E3 225 aa14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 TLL1O43897 1013 aa14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 LGR5O75473 907 aa14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 HMGB1P09429 215 aaKnown RBP14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 SMIM10L2AP0DMW4 78 aa14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 SMIM10L2BP0DMW5 78 aa14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 ADAM17P78536 824 aa14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 ZNF200P98182 395 aaPredicted RBP14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 TAP1Q03518 808 aa14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 MKRN4PQ13434 485 aaPredicted RBP14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 MBTPS1Q14703 1052 aa14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 PPP1R18Q6NYC8 613 aa14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 DHX32Q7L7V1 743 aaKnown RBP14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 ZNF713Q8N859 430 aaPredicted RBP14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 ATP6V0A1Q93050 837 aa14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 ZFP91Q96JP5 570 aaPredicted RBP14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 RNPEPQ9H4A4 650 aa14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 BCAS3Q9H6U6 928 aa14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 RTEL1Q9NZ71 1219 aa14.59□□□□□ -0.07
HNRNPC-221ENST00000555883 SPDYE3A6NKU9 549 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 RSPH10B2B2RC85 870 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 CDC45O75419 566 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 GJB5O95377 273 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 RSPH10BP0C881 870 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 KCNA2P16389 499 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 RXRAP19793 462 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 IGFBP4P22692 258 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 RPAINQ86UA6 219 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 MICU3Q86XE3 530 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 CMTR1Q8N1G2 835 aaKnown RBP14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 RAD9AQ99638 391 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 EHMT1Q9H9B1 1298 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 UBIAD1Q9Y5Z9 338 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 NRCAMQ92823 1304 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 MYH7BA7E2Y1 1941 aa14.58□□□□□ -0.08
HNRNPC-221ENST00000555883 GTPBP6O43824 516 aaPredicted RBP14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 SORBS3O60504 671 aa14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 ITGB5P18084 799 aa14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 THPOP40225 353 aa14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 FUT2Q10981 343 aa14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 MTMR1Q13613 665 aa14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 PLEKHG4Q58EX7 1191 aa14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 ASB2Q96Q27 587 aa14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 LRRC2Q9BYS8 371 aa14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 GLT8D2Q9H1C3 349 aa14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 TSPYL2Q9H2G4 693 aaPredicted RBP14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 MTCH2Q9Y6C9 303 aa14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 CNTNAP5Q8WYK1 1306 aa14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 TET1Q8NFU7 2136 aa14.57□□□□□ -0.08
HNRNPC-221ENST00000555883 TREHO43280 583 aa14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 ZBTB43O43298 467 aa14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 FOSP01100 380 aaPredicted RBP14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 RPLP2P05387 115 aaKnown RBP14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 DEFB103AP81534 67 aa14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 MRPS5P82675 430 aaKnown RBP14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 FAM26DQ5JW98 314 aa14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 HEATR3Q7Z4Q2 680 aa14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 FBXL16Q8N461 479 aa14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 SEPT1Q8WYJ6 367 aa14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 KCNB2Q92953 911 aa14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 JADE2Q9NQC1 790 aa14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 ERAP1Q9NZ08 941 aa14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 LMCD1Q9NZU5 365 aa14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 PCDHA6Q9UN73 950 aa14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 PCDHA8Q9Y5H6 950 aa14.56□□□□□ -0.08
HNRNPC-221ENST00000555883 COL4A6Q14031 1691 aa14.55□□□□□ -0.08
HNRNPC-221ENST00000555883 TRIP12Q14669 1992 aaPredicted RBP14.55□□□□□ -0.08
HNRNPC-221ENST00000555883 ATP9AO75110 1047 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms