RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 FAM47CQ5HY64 1035 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 RASIP1Q5U651 963 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 PSRC1Q6PGN9 363 aaPredicted RBP11□□□□□ -0.65
ACTN1-215ENST00000555616 METTL7BQ6UX53 244 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 C16orf59Q7L2K0 433 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 FAM184AQ8NB25 1140 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 WASF1Q92558 559 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 GPRASP2Q96D09 838 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 RNPC3Q96LT9 517 aaKnown RBP11□□□□□ -0.65
ACTN1-215ENST00000555616 KATNAL1Q9BW62 490 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 RIC8AQ9NPQ8 531 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 STK36Q9NRP7 1315 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 ESYT2A0FGR8 921 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 PITPNM1O00562 1244 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 CTDNEP1O95476 244 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 CYP2C9P11712 490 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 SCG2P13521 617 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 PDIA4P13667 645 aaKnown RBP10.99□□□□□ -0.65
ACTN1-215ENST00000555616 ITGB5P18084 799 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 GJB2P29033 226 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 PSEN2P49810 448 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 SMAD3P84022 425 aaKnown RBP10.99□□□□□ -0.65
ACTN1-215ENST00000555616 AP3B2Q13367 1082 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 NEDD9Q14511 834 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 MFSD10Q14728 455 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 NTRK3Q16288 839 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 FAM109BQ6ICB4 259 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-215ENST00000555616 NLRX1Q86UT6 975 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 CDHR1Q96JP9 859 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 CTAGE1Q96RT6 745 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 SENP7Q9BQF6 1050 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.99□□□□□ -0.658e-7■■■□□ 15.4
ACTN1-215ENST00000555616 C16orf70Q9BSU1 422 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 SLC26A6Q9BXS9 759 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 RNF26Q9BY78 433 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-215ENST00000555616 GLT8D2Q9H1C3 349 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 EHMT1Q9H9B1 1298 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 MLXIPQ9HAP2 919 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 IL23AQ9NPF7 189 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 RTEL1Q9NZ71 1219 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 ORC3Q9UBD5 711 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-215ENST00000555616 PCDHA6Q9UN73 950 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 PCDHA8Q9Y5H6 950 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 UBIAD1Q9Y5Z9 338 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 TANC1Q9C0D5 1861 aa10.99□□□□□ -0.65
ACTN1-215ENST00000555616 PRPF3O43395 683 aaKnown RBP10.98□□□□□ -0.65
ACTN1-215ENST00000555616 SORBS3O60504 671 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 JAK2O60674 1132 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 DEXIO95424 95 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 FOSP01100 380 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-215ENST00000555616 KCNA2P16389 499 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 SREBF1P36956 1147 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 CLK2P49760 499 aaKnown RBP10.98□□□□□ -0.65
ACTN1-215ENST00000555616 RBL2Q08999 1139 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 PKN1Q16512 942 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 KIAA0753Q2KHM9 967 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 TMEM240Q5SV17 173 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 GDF6Q6KF10 455 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-215ENST00000555616 DEFB123Q8N688 67 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 C7orf31Q8N865 590 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 GIMAP8Q8ND71 665 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-215ENST00000555616 PPP1R13LQ8WUF5 828 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 PHKBQ93100 1093 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 VWCEQ96DN2 955 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 GPR20Q99678 358 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 ANO3Q9BYT9 981 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 BCAS3Q9H6U6 928 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 GTF2IRD1Q9UHL9 959 aa10.98□□□□□ -0.65
ACTN1-215ENST00000555616 CIZ1Q9ULV3 898 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-215ENST00000555616 SMCO2A6NFE2 343 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 NOP56O00567 594 aaKnown RBP10.97□□□□□ -0.65
ACTN1-215ENST00000555616 LGALS2P05162 132 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 PFKMP08237 780 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 HOXC8P31273 242 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 RFC2P35250 354 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 CCL23P55773 120 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 MTMR1Q13613 665 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 PTGISQ16647 500 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 CYFIP1Q7L576 1253 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 CCDC155Q8N6L0 562 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 CAGE1Q8TC20 777 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 CCDC12Q8WUD4 166 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-215ENST00000555616 HERVK_113Q902F9 699 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 DHX38Q92620 1227 aaKnown RBP10.97□□□□□ -0.65
ACTN1-215ENST00000555616 ZMYND12Q9H0C1 365 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 JADE2Q9NQC1 790 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 HDAC6Q9UBN7 1215 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 NOD1Q9Y239 953 aa10.97□□□□□ -0.65
ACTN1-215ENST00000555616 TMEM265A0A087WTH1 108 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 H3BQV1 296 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 MAFGO15525 162 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 ACRP10323 421 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 XBP1P17861 261 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 CHMP4BP1P59074 171 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 NUCB2P80303 420 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 BFSP2Q13515 415 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 TRIM29Q14134 588 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 LARP1BQ659C4 914 aaKnown RBP10.96□□□□□ -0.65
ACTN1-215ENST00000555616 MCTP2Q6DN12 878 aa10.96□□□□□ -0.65
ACTN1-215ENST00000555616 ZNF365Q70YC5 407 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms