RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 PTPN11Q06124 597 aaPredicted RBP13.78□□□□□ -0.2
SRP54-206ENST00000555317 SEMA3FQ13275 785 aa13.78□□□□□ -0.2
SRP54-206ENST00000555317 TRIM29Q14134 588 aa13.78□□□□□ -0.2
SRP54-206ENST00000555317 MFSD10Q14728 455 aa13.78□□□□□ -0.2
SRP54-206ENST00000555317 BLIDQ8IZY5 108 aa13.78□□□□□ -0.2
SRP54-206ENST00000555317 RASGRP4Q8TDF6 673 aa13.78□□□□□ -0.2
SRP54-206ENST00000555317 BADQ92934 168 aa13.78□□□□□ -0.2
SRP54-206ENST00000555317 TRIM43Q96BQ3 446 aaPredicted RBP13.78□□□□□ -0.2
SRP54-206ENST00000555317 ZSCAN31Q96LW9 406 aaPredicted RBP13.78□□□□□ -0.2
SRP54-206ENST00000555317 GDF15Q99988 308 aa13.78□□□□□ -0.2
SRP54-206ENST00000555317 ALG1Q9BT22 464 aa13.78□□□□□ -0.2
SRP54-206ENST00000555317 TRPV6Q9H1D0 765 aa13.78□□□□□ -0.2
SRP54-206ENST00000555317 BRMS1Q9HCU9 246 aa13.78□□□□□ -0.2
SRP54-206ENST00000555317 SH2B1Q9NRF2 756 aaPredicted RBP13.78□□□□□ -0.2
SRP54-206ENST00000555317 KCNH7Q9NS40 1196 aa13.78□□□□□ -0.2
SRP54-206ENST00000555317 ZNF215Q9UL58 517 aaPredicted RBP13.78□□□□□ -0.2
SRP54-206ENST00000555317 A0A1W2PPC1 479 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 GRIN2DO15399 1336 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 B4GALT4O60513 344 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 LARGE1O95461 756 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 F2P00734 622 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 TIMP1P01033 207 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 KCNA2P16389 499 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 BMP8BP34820 402 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 FPGSQ05932 587 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 KIAA0753Q2KHM9 967 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 HABP4Q5JVS0 413 aaKnown RBP13.77□□□□□ -0.21
SRP54-206ENST00000555317 NIPA1Q7RTP0 329 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 PLA2G4DQ86XP0 818 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 IL27Q8NEV9 243 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 KAT6AQ92794 2004 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 AIFM3Q96NN9 605 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 PPP1R12CQ9BZL4 782 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 HIPK3Q9H422 1215 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 JPH1Q9HDC5 661 aaPredicted RBP13.77□□□□□ -0.21
SRP54-206ENST00000555317 TRMT13Q9NUP7 481 aaKnown RBP13.77□□□□□ -0.21
SRP54-206ENST00000555317 TBX21Q9UL17 535 aa13.77□□□□□ -0.21
SRP54-206ENST00000555317 CCDC194A0A1B0GVG4 234 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 CD4P01730 458 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 LGALS2P05162 132 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 CYP3A4P08684 503 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 HOXD8P13378 290 aaPredicted RBP13.76□□□□□ -0.21
SRP54-206ENST00000555317 UTP14CQ5TAP6 766 aaKnown RBP13.76□□□□□ -0.21
SRP54-206ENST00000555317 KRT25Q7Z3Z0 450 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 TMEM199Q8N511 208 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 CCDC155Q8N6L0 562 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 DAGLBQ8NCG7 672 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 CYP2W1Q8TAV3 490 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 KAT2BQ92831 832 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 GPR20Q99678 358 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 PCDH10Q9P2E7 1040 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 SLC9A2Q9UBY0 812 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 KCNJ14Q9UNX9 436 aa13.76□□□□□ -0.21
SRP54-206ENST00000555317 NFASCO94856 1347 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 H3BRB1 525 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 MEIS1O00470 390 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 ATP9AO75110 1047 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 CTDNEP1O95476 244 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 TCF7P36402 384 aaPredicted RBP13.75□□□□□ -0.21
SRP54-206ENST00000555317 PPIGQ13427 754 aaKnown RBP eCLIP13.75□□□□□ -0.217e-9■□□□□ 8.7
SRP54-206ENST00000555317 NONOQ15233 471 aaKnown RBP eCLIP13.75□□□□□ -0.21
SRP54-206ENST00000555317 PTGISQ16647 500 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 PRR16Q569H4 304 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 MFSD5Q6N075 450 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 CCDC83Q8IWF9 413 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 TDHQ8IZJ6 230 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 NSUN7Q8NE18 718 aaKnown RBP13.75□□□□□ -0.21
SRP54-206ENST00000555317 PPP1R13LQ8WUF5 828 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 SEPT1Q8WYJ6 367 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 GLG1Q92896 1179 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 KIF2CQ99661 725 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 ZNF577Q9BSK1 485 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 TUT1Q9H6E5 874 aaKnown RBP13.75□□□□□ -0.21
SRP54-206ENST00000555317 AZI2Q9H6S1 392 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 BCAS3Q9H6U6 928 aa13.75□□□□□ -0.21
SRP54-206ENST00000555317 AGO4Q9HCK5 861 aaKnown RBP13.75□□□□□ -0.21
SRP54-206ENST00000555317 FAM86B1E9PN63 330 aa13.74□□□□□ -0.21
SRP54-206ENST00000555317 FAM86B2P0C5J1 330 aa13.74□□□□□ -0.21
SRP54-206ENST00000555317 ARP10275 920 aa13.74□□□□□ -0.21
SRP54-206ENST00000555317 USP11P51784 963 aa13.74□□□□□ -0.21
SRP54-206ENST00000555317 FOSBP53539 338 aa13.74□□□□□ -0.21
SRP54-206ENST00000555317 BFSP2Q13515 415 aa13.74□□□□□ -0.21
SRP54-206ENST00000555317 SESTD1Q86VW0 696 aa13.74□□□□□ -0.21
SRP54-206ENST00000555317 RETREG2Q8NC44 543 aa13.74□□□□□ -0.21
SRP54-206ENST00000555317 TBCKQ8TEA7 893 aa13.74□□□□□ -0.21
SRP54-206ENST00000555317 TBC1D32Q96NH3 1257 aa13.74□□□□□ -0.21
SRP54-206ENST00000555317 LLPHQ9BRT6 129 aaKnown RBP13.74□□□□□ -0.21
SRP54-206ENST00000555317 PHF20Q9BVI0 1012 aa13.74□□□□□ -0.21
SRP54-206ENST00000555317 NOC4LQ9BVI4 516 aaKnown RBP13.74□□□□□ -0.21
SRP54-206ENST00000555317 PRO3102Q9H379 93 aa13.74□□□□□ -0.21
SRP54-206ENST00000555317 HDAC6Q9UBN7 1215 aa13.74□□□□□ -0.21
SRP54-206ENST00000555317 TRIP12Q14669 1992 aaPredicted RBP13.73□□□□□ -0.21
SRP54-206ENST00000555317 C17orf102A2RUQ5 167 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 DDX39AO00148 427 aaKnown RBP13.73□□□□□ -0.21
SRP54-206ENST00000555317 IPO5O00410 1097 aaKnown RBP13.73□□□□□ -0.21
SRP54-206ENST00000555317 ADAMTS3O15072 1205 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 JAK2O60674 1132 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 DTNBO60941 627 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 GNAT1P11488 350 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 CYP2C9P11712 490 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms