RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 KIF11P52732 1056 aa11.78□□□□□ -0.52
MTHFD1-210ENST00000555252 MRPL12P52815 198 aaKnown RBP11.78□□□□□ -0.52
MTHFD1-210ENST00000555252 ASPRV1Q53RT3 343 aa11.78□□□□□ -0.52
MTHFD1-210ENST00000555252 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
MTHFD1-210ENST00000555252 CCDC84Q86UT8 332 aaPredicted RBP11.78□□□□□ -0.52
MTHFD1-210ENST00000555252 CALML4Q96GE6 196 aa11.78□□□□□ -0.52
MTHFD1-210ENST00000555252 CCT8L2Q96SF2 557 aa11.78□□□□□ -0.52
MTHFD1-210ENST00000555252 JPH2Q9BR39 696 aaPredicted RBP11.78□□□□□ -0.52
MTHFD1-210ENST00000555252 RIOX1Q9H6W3 641 aa11.78□□□□□ -0.52
MTHFD1-210ENST00000555252 RGS17Q9UGC6 210 aaPredicted RBP11.78□□□□□ -0.52
MTHFD1-210ENST00000555252 ZNF263O14978 683 aa11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 CCNT1O60563 726 aaKnown RBP11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 SERPINB2P05120 415 aa11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 ELF1P32519 619 aa11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 HSPA9P38646 679 aaKnown RBP11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 EZH2Q15910 746 aaKnown RBP11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 MFSD14BQ5SR56 506 aa11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 PPP1R18Q6NYC8 613 aa11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 FOXR2Q6PJQ5 311 aa11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 CNOT6LQ96LI5 555 aaKnown RBP11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 CCDC43Q96MW1 224 aaKnown RBP11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 NOX5Q96PH1 765 aa11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 DUSP9Q99956 384 aaKnown RBP11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 NOC4LQ9BVI4 516 aaKnown RBP11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 NUCKS1Q9H1E3 243 aaKnown RBP11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 TFR2Q9UP52 801 aa11.77□□□□□ -0.52
MTHFD1-210ENST00000555252 C10orf71Q711Q0 1435 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 GOLGA6L10A6NI86 522 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 ZNF233A6NK53 670 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 RBAK-RBAKDNI3L0D1 243 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 FGFR1OPO95684 399 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 GOLGA8HP0CJ92 632 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 PLCG1P19174 1290 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 ERCC3P19447 782 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 SLC8A1P32418 973 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 NF2P35240 595 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 MTIF2P46199 727 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 PMS1P54277 932 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 ITGB3BPQ13352 177 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 BIRC3Q13489 604 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 LETM2Q2VYF4 491 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 MIIPQ5JXC2 388 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 CEP85LQ5SZL2 805 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 CNNM4Q6P4Q7 775 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 CCDC13Q8IYE1 715 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 REXO1Q8N1G1 1221 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 TBC1D16Q8TBP0 767 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 CEP95Q96GE4 821 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 GJD4Q96KN9 370 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 RAB34Q9BZG1 259 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 LRRC27Q9C0I9 530 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 PLCB1Q9NQ66 1216 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 DUSP10Q9Y6W6 482 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 MYO3BQ8WXR4 1341 aa11.77□□□□□ -0.53
MTHFD1-210ENST00000555252 PP2D1A8MPX8 630 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 COBLO75128 1261 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 GYS1P13807 737 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 CYP27A1Q02318 531 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 TXNRD1Q16881 649 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 TMEM266Q2M3C6 531 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 SLC27A3Q5K4L6 730 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 CCDC121Q6ZUS5 278 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 GPR101Q96P66 508 aaPredicted RBP11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 TRIM9Q9C026 710 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 VEZTQ9HBM0 779 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 TMBIM4Q9HC24 238 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 STK17AQ9UEE5 414 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 SWAP70Q9UH65 585 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 MTMR7Q9Y216 660 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 CDK5RAP2Q96SN8 1893 aa11.76□□□□□ -0.53
MTHFD1-210ENST00000555252 KLRG2A4D1S0 409 aaPredicted RBP11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 C5orf60A6NFR6 353 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 ONECUT3O60422 494 aaPredicted RBP11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 MOCS3O95396 460 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 PAEPP09466 180 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 GHRP10912 638 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 MAGEA1P43355 309 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 FXR2P51116 673 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■■■□ 25.1
MTHFD1-210ENST00000555252 SLC7A5Q01650 507 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 PDE4DQ08499 809 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 SNCBQ16143 134 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 NBPF9Q3BBW0 867 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 LACTB2Q53H82 288 aaPredicted RBP11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 FAM182BQ5T319 152 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 NFRKBQ6P4R8 1299 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 USP17L2Q6R6M4 530 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 RUFY4Q6ZNE9 571 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 SP8Q8IXZ3 490 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 TBCKQ8TEA7 893 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 PIK3R5Q8WYR1 880 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 SYN2Q92777 582 aaPredicted RBP11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 PCMTD1Q96MG8 357 aaPredicted RBP11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 PIGSQ96S52 555 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 TLR10Q9BXR5 811 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 COA1Q9GZY4 146 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 RBM12Q9NTZ6 932 aaKnown RBP11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 ARHGAP20Q9P2F6 1191 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 MAPK8IP1Q9UQF2 711 aa11.75□□□□□ -0.53
MTHFD1-210ENST00000555252 MYH7BA7E2Y1 1941 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms