RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TAS2R42Q7RTR8 314 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 FAM227BQ96M60 508 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 TPCN1Q9ULQ1 816 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 MCF2P10911 925 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 ALDH1B1P30837 517 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 GOLGA8FQ08AF8 430 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 GOLGA8DPQ0D2H9 430 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 CAPS2Q9BXY5 557 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 SERTAD1Q9UHV2 236 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 ORC4O43929 436 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 RPSAP08865 295 aaKnown RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 PARP10Q53GL7 1025 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 SLFN13Q68D06 897 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 KCTD16Q68DU8 428 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 ANKS3Q6ZW76 656 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 MLKLQ8NB16 471 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 RFWD2Q8NHY2 731 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 CYTH2Q99418 400 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 TRPV6Q9H1D0 765 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 NPATQ14207 1427 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 LRRD1A4D1F6 860 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 NPM3O75607 178 aaKnown RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 TBL3Q12788 808 aaKnown RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 TRIM42Q8IWZ5 723 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 CEP70Q8NHQ1 597 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 WARS2Q9UGM6 360 aaKnown RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 RALGAPBQ86X10 1494 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 YTHDC2Q9H6S0 1430 aaKnown RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 A6NNZ2 444 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 PRR23D1E9PI22 279 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 PRR23D2P0DMB1 279 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 IMPDH2P12268 514 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 E2F5Q15329 346 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 TUBB8Q3ZCM7 444 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 SGO2Q562F6 1265 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 TCP11X2Q5H9J9 407 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 KIAA1755Q5JYT7 1200 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 ARMC9Q7Z3E5 817 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 RASSF3Q86WH2 238 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 PCIF1Q9H4Z3 704 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 C6orf203Q9P0P8 240 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 GCNT4Q9P109 453 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 KAT6AQ92794 2004 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 OR52Z1P0C646 297 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 TCF3P15923 654 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 PPARGP37231 505 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 BTDP43251 543 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 NAF1Q96HR8 494 aaKnown RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 COL4A3BPQ9Y5P4 624 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 EYA2O00167 538 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 IFT88Q13099 833 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 MTHFSDQ2M296 383 aaKnown RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 ZSCAN10Q96SZ4 725 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 MROH5Q6ZUA9 1318 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 CARSP49589 748 aaKnown RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 HDAC1Q13547 482 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 TJAP1Q5JTD0 557 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 KRT26Q7Z3Y9 468 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 C1orf131Q8NDD1 294 aaKnown RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 DYDC2Q96IM9 177 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 MED7O43513 233 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 ZBED1O96006 694 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 SLC8A1P32418 973 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 ADAM9Q13443 819 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 KRT24Q2M2I5 525 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 TEX2Q8IWB9 1127 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 ULK4Q96C45 1275 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 IFT43Q96FT9 208 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 ZNF215Q9UL58 517 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 GDAQ9Y2T3 454 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 KDM2BQ8NHM5 1336 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 UPF3AQ9H1J1 476 aaKnown RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 DNAJC17Q9NVM6 304 aaKnown RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 DOLKQ9UPQ8 538 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 ASXL1Q8IXJ9 1541 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 APOA4P06727 396 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 ZNF507Q8TCN5 953 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 FBXO41Q8TF61 875 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 MAGOHBQ96A72 148 aaKnown RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 THOC1Q96FV9 657 aaKnown RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 SAMSN1Q9NSI8 373 aaKnown RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 TXLNGQ9NUQ3 528 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 NDFIP2Q9NV92 336 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 ANGPTL2Q9UKU9 493 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 DISP3Q9P2K9 1392 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 TRPM2O94759 1503 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 WDR17Q8IZU2 1322 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 DNAJC6O75061 913 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 KRT14P02533 472 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 LVRNQ6Q4G3 990 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 OR9Q1Q8NGQ5 310 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 APPBP2Q92624 585 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 FSD1LQ9BXM9 530 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 TRAF3IP3Q9Y228 551 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 SCAF11Q99590 1463 aaKnown RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 GFPT2O94808 682 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 SF3B3Q15393 1217 aaKnown RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 GRAMD4Q6IC98 578 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 BLIDQ8IZY5 108 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 URGCPQ8TCY9 931 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms