RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 Q8N1Y9 231 aa7.14□□□□□ -1.27
PSEN1-211ENST00000554995 C1orf162Q8NEQ5 155 aaPredicted RBP7.14□□□□□ -1.27
PSEN1-211ENST00000554995 PMM1Q92871 262 aa7.14□□□□□ -1.27
PSEN1-211ENST00000554995 TRMT2BQ96GJ1 504 aaKnown RBP7.14□□□□□ -1.27
PSEN1-211ENST00000554995 SCYL1Q96KG9 808 aa7.14□□□□□ -1.27
PSEN1-211ENST00000554995 MARCH2Q9P0N8 246 aa7.14□□□□□ -1.27
PSEN1-211ENST00000554995 SPO11Q9Y5K1 396 aa7.14□□□□□ -1.27
PSEN1-211ENST00000554995 TCRBV5S4A2TA0A5A2 114 aa7.13□□□□□ -1.27
PSEN1-211ENST00000554995 DVL2O14641 736 aa7.13□□□□□ -1.27
PSEN1-211ENST00000554995 PPP1R11O60927 126 aaPredicted RBP7.13□□□□□ -1.27
PSEN1-211ENST00000554995 SNUPNO95149 360 aaKnown RBP7.13□□□□□ -1.27
PSEN1-211ENST00000554995 KRT18P05783 430 aaKnown RBP7.13□□□□□ -1.27
PSEN1-211ENST00000554995 COL6A2P12110 1019 aa7.13□□□□□ -1.27
PSEN1-211ENST00000554995 SLC9A1P19634 815 aa7.13□□□□□ -1.27
PSEN1-211ENST00000554995 SPIRE1Q08AE8 756 aa7.13□□□□□ -1.27
PSEN1-211ENST00000554995 TERF2Q15554 542 aa7.13□□□□□ -1.27
PSEN1-211ENST00000554995 RSPO4Q2I0M5 234 aaPredicted RBP7.13□□□□□ -1.27
PSEN1-211ENST00000554995 HABP4Q5JVS0 413 aaKnown RBP7.13□□□□□ -1.27
PSEN1-211ENST00000554995 HHIPL2Q6UWX4 724 aa7.13□□□□□ -1.27
PSEN1-211ENST00000554995 ARHGAP36Q6ZRI8 547 aa7.13□□□□□ -1.27
PSEN1-211ENST00000554995 PTRH1Q86Y79 214 aaKnown RBP7.13□□□□□ -1.27
PSEN1-211ENST00000554995 KIAA1958Q8N8K9 716 aa7.13□□□□□ -1.27
PSEN1-211ENST00000554995 GOLGA6CA6NDK9 693 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 GOLGA6BA6NDN3 693 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 NKRFO15226 690 aaKnown RBP eCLIP7.12□□□□□ -1.27
PSEN1-211ENST00000554995 CYP26A1O43174 497 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 IGLV1-40P01703 118 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 CT47B1P0C2W7 299 aaPredicted RBP7.12□□□□□ -1.27
PSEN1-211ENST00000554995 GOLGA6DP0CG33 693 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 TCIRG1Q13488 830 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 HLTFQ14527 1009 aaKnown RBP eCLIP7.12□□□□□ -1.27
PSEN1-211ENST00000554995 ZNF174Q15697 407 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 GFOD2Q3B7J2 385 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 NKAPLQ5M9Q1 402 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 CXorf57Q6NSI4 855 aaKnown RBP7.12□□□□□ -1.27
PSEN1-211ENST00000554995 PGM2L1Q6PCE3 622 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 OTOP3Q7RTS5 596 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 NOSTRINQ8IVI9 506 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 TPH2Q8IWU9 490 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 FAXDC2Q96IV6 333 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 ELF4Q99607 663 aaPredicted RBP7.12□□□□□ -1.27
PSEN1-211ENST00000554995 EPB41L1Q9H4G0 881 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 TCF7L1Q9HCS4 588 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 GOLGA6AQ9NYA3 693 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 X6R8D5 127 aa7.12□□□□□ -1.27
PSEN1-211ENST00000554995 ARID1BQ8NFD5 2236 aaPredicted RBP7.11□□□□□ -1.27
PSEN1-211ENST00000554995 LOC102724159A0A0B4J2E5 919 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 C22orf46C9J442 243 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 MAN2B1O00754 1011 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 GSC2O15499 205 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 PLIN1O60240 522 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 CFBP00751 764 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 H2AFB1P0C5Y9 115 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 H2AFB2P0C5Z0 115 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 PF4V1P10720 104 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 RBP3P10745 1247 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 LSP1P33241 339 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 RECQLP46063 649 aaPredicted RBP7.11□□□□□ -1.27
PSEN1-211ENST00000554995 SCAND1P57086 179 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 PHC1P78364 1004 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 SMAD3P84022 425 aaKnown RBP7.11□□□□□ -1.27
PSEN1-211ENST00000554995 UBE4AQ14139 1066 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 PWP2Q15269 919 aaKnown RBP7.11□□□□□ -1.27
PSEN1-211ENST00000554995 SMAD2Q15796 467 aaKnown RBP7.11□□□□□ -1.27
PSEN1-211ENST00000554995 TMEM240Q5SV17 173 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 ANGEL2Q5VTE6 544 aaKnown RBP7.11□□□□□ -1.27
PSEN1-211ENST00000554995 PNMA8AQ86V59 439 aaPredicted RBP7.11□□□□□ -1.27
PSEN1-211ENST00000554995 RASSF3Q86WH2 238 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 CMIPQ8IY22 773 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 CPA6Q8N4T0 437 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 SH3RF2Q8TEC5 729 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 MAP6Q96JE9 813 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 JMJD8Q96S16 334 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 G6PC3Q9BUM1 346 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 MS4A5Q9H3V2 200 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 ARNT2Q9HBZ2 717 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 TPSG1Q9NRR2 321 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 TOPORSQ9NS56 1045 aaPredicted RBP7.11□□□□□ -1.27
PSEN1-211ENST00000554995 TOMM22Q9NS69 142 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 TNFRSF10DQ9UBN6 386 aa7.11□□□□□ -1.27
PSEN1-211ENST00000554995 ZC3H7BQ9UGR2 993 aaKnown RBP7.11□□□□□ -1.27
PSEN1-211ENST00000554995 COA3Q9Y2R0 106 aaPredicted RBP7.11□□□□□ -1.27
PSEN1-211ENST00000554995 FADS2P1A8MWK0 482 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 FUCA1P04066 466 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 MYL1P05976 194 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 FSTP19883 344 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 KIF11P52732 1056 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 LRRC32Q14392 662 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 ZNF610Q8N9Z0 462 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 PIP4K2CQ8TBX8 421 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 PLEKHO2Q8TD55 490 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 MORC4Q8TE76 937 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 HHIPL1Q96JK4 782 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 HRASLS5Q96KN8 279 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 PCIF1Q9H4Z3 704 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 MYH16Q9H6N6 1097 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 PNMA8BQ9ULN7 279 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-211ENST00000554995 SRPK3Q9UPE1 567 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 ANKRD6Q9Y2G4 727 aa7.1□□□□□ -1.27
PSEN1-211ENST00000554995 NOC2LQ9Y3T9 749 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms