RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 F8W031 263 aaPredicted RBP17.16■□□□□ 0.34
SYNE3-203ENST00000554873 NMT2O60551 498 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 RNF8O76064 485 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 FGRP09769 529 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 SETSIPP0DME0 302 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 MAGEA8P43361 318 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 EVX2Q03828 476 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 DDAH1O94760 285 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 IMPDH2P12268 514 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 KIF5BP33176 963 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 RANBP1P43487 201 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 IFI16Q16666 785 aaKnown RBP17.16■□□□□ 0.34
SYNE3-203ENST00000554873 ODF2Q5BJF6 829 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 ANKRD20A2Q5SQ80 823 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 ANKRD20A1Q5TYW2 823 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 ANKRD20A3Q5VUR7 823 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 CCDC155Q8N6L0 562 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 FAM167BQ9BTA0 163 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 EHD2Q9NZN4 543 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 BAZ2AQ9UIF9 1905 aaKnown RBP17.16■□□□□ 0.34
SYNE3-203ENST00000554873 PLCH1Q4KWH8 1693 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 CXCR5P32302 372 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 AGBL2Q5U5Z8 902 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 SMCR8Q8TEV9 937 aaPredicted RBP17.16■□□□□ 0.34
SYNE3-203ENST00000554873 CHMP6Q96FZ7 201 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 GORASP1Q9BQQ3 440 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 BRIP1Q9BX63 1249 aa17.16■□□□□ 0.34
SYNE3-203ENST00000554873 LRRD1A4D1F6 860 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 H7C1D1 291 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 ABLIM1O14639 778 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 PARP1P09874 1014 aaKnown RBP17.15■□□□□ 0.34
SYNE3-203ENST00000554873 PYGBP11216 843 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 TRAPPC10P48553 1259 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 CYP27A1Q02318 531 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 MTA1Q13330 715 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 ITIH4Q14624 930 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 CCDC96Q2M329 555 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 CASKIN2Q8WXE0 1202 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.15■□□□□ 0.34
SYNE3-203ENST00000554873 PYM1Q9BRP8 204 aaKnown RBP17.15■□□□□ 0.34
SYNE3-203ENST00000554873 SH2D4AQ9H788 454 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 LRWD1Q9UFC0 647 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 CNOT8Q9UFF9 292 aaKnown RBP17.15■□□□□ 0.34
SYNE3-203ENST00000554873 DISP2A7MBM2 1401 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 ZNF804BA4D1E1 1349 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 DPPA5A6NC42 116 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 TRIM49BA6NDI0 452 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 ZSCAN5CA6NGD5 496 aaPredicted RBP17.15■□□□□ 0.34
SYNE3-203ENST00000554873 LGALS16A8MUM7 142 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 USP17L12C9JPN9 530 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 USP17L21D6R901 530 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 SCG2P13521 617 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 SEPT2Q15019 361 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 SPA17Q15506 151 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 HHATQ5VTY9 493 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 NCAPG2Q86XI2 1143 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 C4orf32Q8N8J7 132 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 ZNF384Q8TF68 577 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 RMND1Q9NWS8 449 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 SLAIN2Q9P270 581 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 ANKIB1Q9P2G1 1089 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 RNF14Q9UBS8 474 aa17.15■□□□□ 0.34
SYNE3-203ENST00000554873 DUOX1Q9NRD9 1551 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 NUTM2BA6NNL0 878 aaPredicted RBP17.14■□□□□ 0.33
SYNE3-203ENST00000554873 NUTM2EB1AL46 878 aaPredicted RBP17.14■□□□□ 0.33
SYNE3-203ENST00000554873 NPTXRO95502 500 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 NQO1P15559 274 aaKnown RBP17.14■□□□□ 0.33
SYNE3-203ENST00000554873 CFAP221Q4G0U5 840 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 TEKT4Q8WW24 435 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 PSMB7Q99436 277 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 NHSL1Q5SYE7 1610 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 GOLGA6L10A0A0M3HER8 536 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 H0YGN5 161 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 CNGA1P29973 690 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 PMS1P54277 932 aaKnown RBP17.14■□□□□ 0.33
SYNE3-203ENST00000554873 MXRA7P84157 204 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 PPARDQ03181 441 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 INTS5Q6P9B9 1019 aaKnown RBP17.14■□□□□ 0.33
SYNE3-203ENST00000554873 CACNA2D4Q7Z3S7 1137 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 BTG4Q9NY30 223 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 NFS1Q9Y697 457 aa17.14■□□□□ 0.33
SYNE3-203ENST00000554873 ZNF844Q08AG5 666 aa17.13■□□□□ 0.33
SYNE3-203ENST00000554873 TAF11Q15544 211 aa17.13■□□□□ 0.33
SYNE3-203ENST00000554873 FAM47AQ5JRC9 791 aa17.13■□□□□ 0.33
SYNE3-203ENST00000554873 C1QTNF12Q5T7M4 302 aa17.13■□□□□ 0.33
SYNE3-203ENST00000554873 SDCCAG8Q86SQ7 713 aaPredicted RBP17.13■□□□□ 0.33
SYNE3-203ENST00000554873 RBM12BQ8IXT5 1001 aaKnown RBP17.13■□□□□ 0.33
SYNE3-203ENST00000554873 ADSSL1Q8N142 457 aa17.13■□□□□ 0.33
SYNE3-203ENST00000554873 NAF1Q96HR8 494 aaKnown RBP17.13■□□□□ 0.33
SYNE3-203ENST00000554873 EVI5O60447 810 aa17.13■□□□□ 0.33
SYNE3-203ENST00000554873 MOCS3O95396 460 aa17.13■□□□□ 0.33
SYNE3-203ENST00000554873 ATP2A2P16615 1042 aaKnown RBP17.13■□□□□ 0.33
SYNE3-203ENST00000554873 HSD17B3P37058 310 aa17.13■□□□□ 0.33
SYNE3-203ENST00000554873 CUL3Q13618 768 aa17.13■□□□□ 0.33
SYNE3-203ENST00000554873 PFKFB3Q16875 520 aaPredicted RBP17.13■□□□□ 0.33
SYNE3-203ENST00000554873 ZNF507Q8TCN5 953 aa17.13■□□□□ 0.33
SYNE3-203ENST00000554873 RBM41Q96IZ5 413 aaKnown RBP17.13■□□□□ 0.33
SYNE3-203ENST00000554873 MLXIPQ9HAP2 919 aa17.13■□□□□ 0.33
SYNE3-203ENST00000554873 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
SYNE3-203ENST00000554873 LONP1P36776 959 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms