RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 MMTAG2Q9BU76 263 aaKnown RBP13.06□□□□□ -0.32
XRCC3-208ENST00000554811 IKZF4Q9H2S9 585 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 SH3GLB2Q9NR46 395 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 CHORDC1Q9UHD1 332 aaPredicted RBP13.06□□□□□ -0.32
XRCC3-208ENST00000554811 ZNF142P52746 1687 aaPredicted RBP13.06□□□□□ -0.32
XRCC3-208ENST00000554811 PDHBP11177 359 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 KLRC1P26715 233 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 CYP2J2P51589 502 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 FKBP3Q00688 224 aaKnown RBP13.06□□□□□ -0.32
XRCC3-208ENST00000554811 IFFO1Q0D2I5 559 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 HNRNPLLQ8WVV9 542 aaKnown RBP13.06□□□□□ -0.32
XRCC3-208ENST00000554811 RAD54LQ92698 747 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 SH2D4AQ9H788 454 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 FAM184BQ9ULE4 1060 aa13.06□□□□□ -0.32
XRCC3-208ENST00000554811 NUP188Q5SRE5 1749 aa13.05□□□□□ -0.32
XRCC3-208ENST00000554811 HLA-DOAP06340 250 aa13.05□□□□□ -0.32
XRCC3-208ENST00000554811 PLA2G4BP0C869 781 aa13.05□□□□□ -0.32
XRCC3-208ENST00000554811 BLOC1S4Q9NUP1 217 aa13.05□□□□□ -0.32
XRCC3-208ENST00000554811 STIM2Q9P246 746 aa13.05□□□□□ -0.32
XRCC3-208ENST00000554811 NUP98P52948 1817 aa13.05□□□□□ -0.32
XRCC3-208ENST00000554811 CFBP00751 764 aa13.05□□□□□ -0.32
XRCC3-208ENST00000554811 TCP1P17987 556 aaKnown RBP13.05□□□□□ -0.32
XRCC3-208ENST00000554811 SLC9A1P19634 815 aa13.05□□□□□ -0.32
XRCC3-208ENST00000554811 GUCY1A3Q02108 690 aa13.05□□□□□ -0.32
XRCC3-208ENST00000554811 ECM1Q16610 540 aa13.05□□□□□ -0.32
XRCC3-208ENST00000554811 TPH2Q8IWU9 490 aa13.05□□□□□ -0.32
XRCC3-208ENST00000554811 FNBP4Q8N3X1 1017 aaPredicted RBP13.05□□□□□ -0.32
XRCC3-208ENST00000554811 PNMA5Q96PV4 448 aa13.05□□□□□ -0.32
XRCC3-208ENST00000554811 CDCA7Q9BWT1 371 aaPredicted RBP13.05□□□□□ -0.32
XRCC3-208ENST00000554811 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
XRCC3-208ENST00000554811 RASSF10A6NK89 507 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 SPDYE3A6NKU9 549 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 OPA1O60313 960 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 LRRN2O75325 713 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 RPS6KA4O75676 772 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 COPB2P35606 906 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 GPATCH11Q8N954 259 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 TSEN2Q8NCE0 465 aaKnown RBP13.04□□□□□ -0.32
XRCC3-208ENST00000554811 LZTS2Q9BRK4 669 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 BCAS3Q9H6U6 928 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 SERPINB13Q9UIV8 391 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 PARP4Q9UKK3 1724 aaKnown RBP13.04□□□□□ -0.32
XRCC3-208ENST00000554811 A0A087X0T9 212 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 LAD1O00515 517 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 SYF2O95926 243 aaKnown RBP13.04□□□□□ -0.32
XRCC3-208ENST00000554811 TUBBP07437 444 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 FAM153BP0C7A2 387 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 FAM228BP0C875 321 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 KRT13P13646 458 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 NNTQ13423 1086 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 RPS6KA1Q15418 735 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 FAM153CQ494X1 144 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 NEDD1Q8NHV4 660 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 DDX47Q9H0S4 455 aaKnown RBP13.04□□□□□ -0.32
XRCC3-208ENST00000554811 FAM153AQ9UHL3 310 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 SCAF8Q9UPN6 1271 aaKnown RBP13.04□□□□□ -0.32
XRCC3-208ENST00000554811 GFPT2O94808 682 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 PLCG2P16885 1265 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 MNAT1P51948 309 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 GALNT17Q6IS24 598 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 CCDC174Q6PII3 467 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 SYCP3Q8IZU3 236 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 RETREG2Q8NC44 543 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 C7orf25Q9BPX7 421 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 PCDHAC2Q9Y5I4 1007 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 PLEKHG2Q9H7P9 1386 aa13.04□□□□□ -0.32
XRCC3-208ENST00000554811 TUBB4BP68371 445 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 DAAM2Q86T65 1068 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 SLF2Q8IX21 1173 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 IFT20Q8IY31 132 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 BHMT2Q9H2M3 363 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 PPP1R1BQ9UD71 204 aaPredicted RBP13.03□□□□□ -0.32
XRCC3-208ENST00000554811 ARMCX3Q9UH62 379 aaPredicted RBP13.03□□□□□ -0.32
XRCC3-208ENST00000554811 SLIT2O94813 1529 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 SERPINB2P05120 415 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 RTFDC1Q9BY42 306 aaPredicted RBP13.03□□□□□ -0.32
XRCC3-208ENST00000554811 CUEDC2Q9H467 287 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 PLAGL2Q9UPG8 496 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 RSPH10B2B2RC85 870 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 E7EVH7 732 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 GLI1P08151 1106 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 RSPH10BP0C881 870 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 KCNH2Q12809 1159 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 NFIAQ12857 509 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 PAPD7Q5XG87 772 aaKnown RBP13.03□□□□□ -0.32
XRCC3-208ENST00000554811 PDXDC1Q6P996 788 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 CCDC25Q86WR0 208 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 SFR1Q86XK3 245 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 CREG2Q8IUH2 290 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 MYCT1Q8N699 235 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 RGL1Q9NZL6 768 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 LEMD3Q9Y2U8 911 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 DAGLAQ9Y4D2 1042 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 ADAMTS7Q9UKP4 1686 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 PKD1L3Q7Z443 1732 aa13.03□□□□□ -0.32
XRCC3-208ENST00000554811 SEC24CP53992 1094 aa13.02□□□□□ -0.32
XRCC3-208ENST00000554811 CTTNQ14247 550 aaKnown RBP13.02□□□□□ -0.32
XRCC3-208ENST00000554811 PEX26Q7Z412 305 aa13.02□□□□□ -0.32
XRCC3-208ENST00000554811 MTMR4Q9NYA4 1195 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms