RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 ATRNL1Q5VV63 1379 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 A0A1W2PP55 124 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 DDTLA6NHG4 134 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-229ENST00000554672 NBPF7P0C2Y1 421 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-229ENST00000554672 SLC5A1P13866 664 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 ZKSCAN1P17029 563 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-229ENST00000554672 MAP4P27816 1152 aaKnown RBP5.99□□□□□ -1.45
ATXN3-229ENST00000554672 PRDX5P30044 214 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 MAPK4P31152 587 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 HOXA7P31268 230 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-229ENST00000554672 RGS2P41220 211 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 GRIA4P48058 902 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 SMAD3P84022 425 aaKnown RBP5.99□□□□□ -1.45
ATXN3-229ENST00000554672 DDX10Q13206 875 aaKnown RBP5.99□□□□□ -1.45
ATXN3-229ENST00000554672 PDE3AQ14432 1141 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 SHHQ15465 462 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 MCTP1Q6DN14 999 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 SLC4A10Q6U841 1118 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 CCNJLQ8IV13 435 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 CCAR1Q8IX12 1150 aaKnown RBP5.99□□□□□ -1.45
ATXN3-229ENST00000554672 GALNT12Q8IXK2 581 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 ZGPATQ8N5A5 531 aaKnown RBP5.99□□□□□ -1.45
ATXN3-229ENST00000554672 C12orf50Q8NA57 414 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-229ENST00000554672 SOCS4Q8WXH5 440 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 MYLIPQ8WY64 445 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 USP6NLQ92738 828 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 P2RX7Q99572 595 aaKnown RBP5.99□□□□□ -1.45
ATXN3-229ENST00000554672 OSBPL5Q9H0X9 879 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-229ENST00000554672 DENND2AQ9ULE3 1009 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 MTMR7Q9Y216 660 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 HIF3AQ9Y2N7 669 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 UTYO14607 1347 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 SALL1Q9NSC2 1324 aa5.99□□□□□ -1.45
ATXN3-229ENST00000554672 TMEM265A0A087WTH1 108 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 A0A096LPE4 126 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 A0A1W2PPZ6 126 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 WDR64B1ANS9 1081 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 EYA2O00167 538 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 MSCO60682 206 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 CTSBP07858 339 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 FOSL2P15408 326 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 CCND3P30281 292 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-229ENST00000554672 SERPINB4P48594 390 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 HMGCS2P54868 508 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 IRX3P78415 501 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-229ENST00000554672 ARHGAP4P98171 946 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 GSTM4Q03013 218 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 EXOSC9Q06265 439 aaKnown RBP5.98□□□□□ -1.45
ATXN3-229ENST00000554672 EXOSC6Q5RKV6 272 aaKnown RBP5.98□□□□□ -1.45
ATXN3-229ENST00000554672 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 MFSD14CQ5VZR4 134 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 ERICH6Q7L0X2 663 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 CCDC84Q86UT8 332 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-229ENST00000554672 DTX1Q86Y01 620 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 ANKRD44Q8N8A2 993 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 FAM122AQ96E09 287 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 EDC3Q96F86 508 aaKnown RBP5.98□□□□□ -1.45
ATXN3-229ENST00000554672 MFSD14AQ96MC6 490 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 TTYH1Q9H313 450 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-229ENST00000554672 BICC1Q9H694 974 aaKnown RBP5.98□□□□□ -1.45
ATXN3-229ENST00000554672 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.98□□□□□ -1.45
ATXN3-229ENST00000554672 AS3MTQ9HBK9 375 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 EGFL7Q9UHF1 273 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 GAKO14976 1311 aa5.98□□□□□ -1.45
ATXN3-229ENST00000554672 ZSWIM8A7E2V4 1837 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 C19orf81C9J6K1 198 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 DNM1LO00429 736 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 GLRX3O76003 335 aaKnown RBP5.97□□□□□ -1.45
ATXN3-229ENST00000554672 MAP4K4O95819 1239 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-229ENST00000554672 F13BP05160 661 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 PLA2G5P39877 138 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 CAP2P40123 477 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 GP2P55259 537 aaKnown RBP5.97□□□□□ -1.45
ATXN3-229ENST00000554672 BACE1P56817 501 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 RTP1P59025 263 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 HERVK_113P62684 666 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 PICALMQ13492 652 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 C9orf50Q5SZB4 431 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 SPTY2D1Q68D10 685 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-229ENST00000554672 CDPF1Q6NVV7 123 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 GPR142Q7Z601 462 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 PLEKHH3Q7Z736 793 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 WDR63Q8IWG1 891 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 ARRDC4Q8NCT1 418 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 C2CD4AQ8NCU7 369 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-229ENST00000554672 KLHDC4Q8TBB5 520 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 LPAR1Q92633 364 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 WDR18Q9BV38 432 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 PRKRIP1Q9H875 184 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-229ENST00000554672 TXNRD2Q9NNW7 524 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 DDX4Q9NQI0 724 aaKnown RBP5.97□□□□□ -1.45
ATXN3-229ENST00000554672 TMOD4Q9NZQ9 345 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-229ENST00000554672 RBPJLQ9UBG7 517 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 FANCIQ9NVI1 1328 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 OTOFQ9HC10 1997 aa5.97□□□□□ -1.45
ATXN3-229ENST00000554672 GPR75-ASB3A0A0A6YYF3 556 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 GAS2O43903 313 aaKnown RBP5.96□□□□□ -1.46
ATXN3-229ENST00000554672 IGHA2P01877 340 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 LDHCP07864 332 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms