RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 PLAGL2Q9UPG8 496 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 PCDHAC2Q9Y5I4 1007 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 DDX60LQ5H9U9 1706 aaKnown RBP7.32□□□□□ -1.24
ATXN3-226ENST00000554350 COL4A1P02462 1669 aa7.32□□□□□ -1.24
ATXN3-226ENST00000554350 XDHP47989 1333 aa7.31□□□□□ -1.24
ATXN3-226ENST00000554350 TNPO2O14787 897 aaKnown RBP7.31□□□□□ -1.24
ATXN3-226ENST00000554350 ANXA1P04083 346 aa7.31□□□□□ -1.24
ATXN3-226ENST00000554350 C8AP07357 584 aa7.31□□□□□ -1.24
ATXN3-226ENST00000554350 EIF2S2P20042 333 aaKnown RBP7.31□□□□□ -1.24
ATXN3-226ENST00000554350 FUT4P22083 530 aa7.31□□□□□ -1.24
ATXN3-226ENST00000554350 OXCT1P55809 520 aa7.31□□□□□ -1.24
ATXN3-226ENST00000554350 SMAD3P84022 425 aaKnown RBP7.31□□□□□ -1.24
ATXN3-226ENST00000554350 SF3B3Q15393 1217 aaKnown RBP7.31□□□□□ -1.24
ATXN3-226ENST00000554350 SHHQ15465 462 aa7.31□□□□□ -1.24
ATXN3-226ENST00000554350 TAF7Q15545 349 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-226ENST00000554350 CCDC85BQ15834 202 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-226ENST00000554350 FAM214BQ7L5A3 538 aa7.31□□□□□ -1.24
ATXN3-226ENST00000554350 KCNB2Q92953 911 aa7.31□□□□□ -1.24
ATXN3-226ENST00000554350 ZBED3Q96IU2 234 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-226ENST00000554350 PHACTR3Q96KR7 559 aa7.31□□□□□ -1.24
ATXN3-226ENST00000554350 BDP1A6H8Y1 2624 aa7.3□□□□□ -1.24
ATXN3-226ENST00000554350 XRCC5P13010 732 aaKnown RBP7.3□□□□□ -1.24
ATXN3-226ENST00000554350 ARNTP27540 789 aa7.3□□□□□ -1.24
ATXN3-226ENST00000554350 PRKAR2BP31323 418 aa7.3□□□□□ -1.24
ATXN3-226ENST00000554350 NTF4P34130 210 aa7.3□□□□□ -1.24
ATXN3-226ENST00000554350 PPP2R3AQ06190 1150 aa7.3□□□□□ -1.24
ATXN3-226ENST00000554350 LRRC26Q2I0M4 334 aa7.3□□□□□ -1.24
ATXN3-226ENST00000554350 CFAP100Q494V2 611 aa7.3□□□□□ -1.24
ATXN3-226ENST00000554350 NXPE4Q6UWF7 544 aa7.3□□□□□ -1.24
ATXN3-226ENST00000554350 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-226ENST00000554350 COA1Q9GZY4 146 aa7.3□□□□□ -1.24
ATXN3-226ENST00000554350 MBNL3Q9NUK0 354 aaKnown RBP7.3□□□□□ -1.24
ATXN3-226ENST00000554350 PCOLCE2Q9UKZ9 415 aa7.3□□□□□ -1.24
ATXN3-226ENST00000554350 KNSTRNQ9Y448 316 aa7.3□□□□□ -1.24
ATXN3-226ENST00000554350 TCF20Q9UGU0 1960 aaKnown RBP7.29□□□□□ -1.24
ATXN3-226ENST00000554350 PFASO15067 1338 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 IRS4O14654 1257 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-226ENST00000554350 RNGTTO60942 597 aaKnown RBP7.29□□□□□ -1.24
ATXN3-226ENST00000554350 RNASE1P07998 156 aaKnown RBP7.29□□□□□ -1.24
ATXN3-226ENST00000554350 ERVK-24P63145 666 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 TNFAIP1Q13829 316 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 ENOX2Q16206 610 aaKnown RBP7.29□□□□□ -1.24
ATXN3-226ENST00000554350 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.29□□□□□ -1.24
ATXN3-226ENST00000554350 C9orf50Q5SZB4 431 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 COPS6Q7L5N1 327 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 ANKRD23Q86SG2 305 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 ERO1BQ86YB8 467 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 ANKRD18AQ8IVF6 992 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 GPBAR1Q8TDU6 330 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 COA7Q96BR5 231 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 HEXIM2Q96MH2 286 aaKnown RBP7.29□□□□□ -1.24
ATXN3-226ENST00000554350 UIMC1Q96RL1 719 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 WRNIP1Q96S55 665 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 PARK7Q99497 189 aaKnown RBP7.29□□□□□ -1.24
ATXN3-226ENST00000554350 MKNK2Q9HBH9 465 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 VAV3Q9UKW4 847 aa7.29□□□□□ -1.24
ATXN3-226ENST00000554350 GNEQ9Y223 722 aaKnown RBP7.29□□□□□ -1.24
ATXN3-226ENST00000554350 MGAMO43451 1857 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 TCP10L2B9ZVM9 353 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 TREHO43280 583 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 HMGCRP04035 888 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 CYP2C8P10632 490 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 NME2P22392 152 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 PRKCQQ04759 706 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 PPIL2Q13356 520 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 PROSER3Q2NL68 480 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 LCE1DQ5T752 114 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 UBE3DQ7Z6J8 389 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 RNF214Q8ND24 703 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.28□□□□□ -1.24
ATXN3-226ENST00000554350 XAGE3Q8WTP9 111 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 ZKSCAN4Q969J2 545 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-226ENST00000554350 PRMT6Q96LA8 375 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-226ENST00000554350 ARID3AQ99856 593 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 PRDM5Q9NQX1 630 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-226ENST00000554350 DCTN4Q9UJW0 460 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 SNCAIPQ9Y6H5 919 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 MED23Q9ULK4 1368 aa7.28□□□□□ -1.24
ATXN3-226ENST00000554350 PNMA6FA0A0J9YX94 578 aa7.27□□□□□ -1.25
ATXN3-226ENST00000554350 PAGE1O75459 146 aa7.27□□□□□ -1.25
ATXN3-226ENST00000554350 CEACAM5P06731 702 aa7.27□□□□□ -1.25
ATXN3-226ENST00000554350 U2AF1L5P0DN76 240 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-226ENST00000554350 BMP6P22004 513 aa7.27□□□□□ -1.25
ATXN3-226ENST00000554350 EIF4A1P60842 406 aaKnown RBP7.27□□□□□ -1.25
ATXN3-226ENST00000554350 U2AF1Q01081 240 aaKnown RBP eCLIP7.27□□□□□ -1.25
ATXN3-226ENST00000554350 RING1Q06587 406 aa7.27□□□□□ -1.25
ATXN3-226ENST00000554350 CNGB1Q14028 1251 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-226ENST00000554350 IFI16Q16666 785 aaKnown RBP7.27□□□□□ -1.25
ATXN3-226ENST00000554350 CCDC152Q4G0S7 254 aa7.27□□□□□ -1.25
ATXN3-226ENST00000554350 RASIP1Q5U651 963 aa7.27□□□□□ -1.25
ATXN3-226ENST00000554350 TOP6BLQ8N6T0 577 aa7.27□□□□□ -1.25
ATXN3-226ENST00000554350 PNISRQ8TF01 805 aaKnown RBP7.27□□□□□ -1.25
ATXN3-226ENST00000554350 RNPC3Q96LT9 517 aaKnown RBP7.27□□□□□ -1.25
ATXN3-226ENST00000554350 TMEM39BQ9GZU3 492 aa7.27□□□□□ -1.25
ATXN3-226ENST00000554350 TNKS2Q9H2K2 1166 aa7.27□□□□□ -1.25
ATXN3-226ENST00000554350 AKAP2Q9Y2D5 859 aa7.27□□□□□ -1.25
ATXN3-226ENST00000554350 ECM29Q5VYK3 1845 aa7.27□□□□□ -1.25
ATXN3-226ENST00000554350 AOX1Q06278 1338 aa7.27□□□□□ -1.25
ATXN3-226ENST00000554350 SMIM22K7EJ46 135 aa7.26□□□□□ -1.25
ATXN3-226ENST00000554350 ENC1O14682 589 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms