RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 ARSHQ5FYA8 562 aa14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 TCP11X2Q5H9J9 407 aa14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 FAM20AQ96MK3 541 aa14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 EIF2AK1Q9BQI3 630 aaKnown RBP14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 AS3MTQ9HBK9 375 aa14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 R3HCC1Q9Y3T6 440 aaKnown RBP14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 CTDP1Q9Y5B0 961 aaPredicted RBP14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 SNCAIPQ9Y6H5 919 aa14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 KDM3AQ9Y4C1 1321 aa14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 COASYQ13057 564 aa14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 OTOP1Q7RTM1 612 aa14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 SYTL5Q8TDW5 730 aaPredicted RBP14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 PIGOQ8TEQ8 1089 aa14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 CPLX3Q8WVH0 158 aa14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 GINM1Q9NU53 330 aa14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 KIAA1217Q5T5P2 1943 aa14.22□□□□□ -0.13
VIPAS39-206ENST00000553888 PSMD10O75832 226 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 CYP11B2P19099 503 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 SLC12A3P55017 1021 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 P2RX5Q93086 422 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 CLMNQ96JQ2 1002 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 NT5C3AQ9H0P0 336 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 ZHX3Q9H4I2 956 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 WRAP73Q9P2S5 460 aaPredicted RBP14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 AFG3L2Q9Y4W6 797 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 ZBED4O75132 1171 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 MRPS9P82933 396 aaKnown RBP14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 TBX2Q13207 712 aaPredicted RBP14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 STIM1Q13586 685 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 SUPT20HL1Q3ZLR7 823 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 SPECC1LQ69YQ0 1117 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 CNNM4Q6P4Q7 775 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 ZNF526Q8TF50 670 aaPredicted RBP14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 DCPSQ96C86 337 aaKnown RBP14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 DYDC2Q96IM9 177 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 C16orf45Q96MC5 204 aaPredicted RBP14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 ZNF577Q9BSK1 485 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 PANK4Q9NVE7 773 aa14.21□□□□□ -0.13
VIPAS39-206ENST00000553888 PCNTO95613 3336 aa14.21□□□□□ -0.14
VIPAS39-206ENST00000553888 RPA1P27694 616 aa14.21□□□□□ -0.14
VIPAS39-206ENST00000553888 COPB1P53618 953 aaKnown RBP14.21□□□□□ -0.14
VIPAS39-206ENST00000553888 TREML2Q5T2D2 321 aa14.21□□□□□ -0.14
VIPAS39-206ENST00000553888 SNRNP48Q6IEG0 339 aaKnown RBP14.21□□□□□ -0.14
VIPAS39-206ENST00000553888 KRT26Q7Z3Y9 468 aa14.21□□□□□ -0.14
VIPAS39-206ENST00000553888 CSGALNACT2Q8N6G5 542 aa14.21□□□□□ -0.14
VIPAS39-206ENST00000553888 REPS2Q8NFH8 660 aa14.21□□□□□ -0.14
VIPAS39-206ENST00000553888 SLC5A5Q92911 643 aa14.21□□□□□ -0.14
VIPAS39-206ENST00000553888 CCDC47Q96A33 483 aaKnown RBP14.21□□□□□ -0.14
VIPAS39-206ENST00000553888 UNC45AQ9H3U1 944 aa14.21□□□□□ -0.14
VIPAS39-206ENST00000553888 PAPPA2Q9BXP8 1791 aa14.21□□□□□ -0.14
VIPAS39-206ENST00000553888 N4BP3O15049 544 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 GAS7O60861 476 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 MYCLP12524 364 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 EHHADHQ08426 723 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 TMEM132BQ14DG7 1078 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 HAUS3Q68CZ6 603 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 SULF1Q8IWU6 871 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 TPH2Q8IWU9 490 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 CCDC150Q8NCX0 1101 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 RNF146Q9NTX7 359 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 LIMA1Q9UHB6 759 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 RPTORQ8N122 1335 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 RSPH10B2B2RC85 870 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 RSPH10BP0C881 870 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 CCNE1P24864 410 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 PLS1Q14651 629 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 TC2NQ8N9U0 490 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 DHTKD1Q96HY7 919 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 MXRA8Q9BRK3 442 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 BHMT2Q9H2M3 363 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 PPP2R3BQ9Y5P8 575 aa14.2□□□□□ -0.14
VIPAS39-206ENST00000553888 LCTP09848 1927 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 PVALEFA0A1B0GWK0 134 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 PES1O00541 588 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 DSG3P32926 999 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 PBX1P40424 430 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 BAATQ14032 418 aaPredicted RBP14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 ERMNQ8TAM6 284 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 RUSC1Q9BVN2 902 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 ELP3Q9H9T3 547 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 KCNH7Q9NS40 1196 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 ZNF214Q9UL59 606 aaPredicted RBP14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 RNF225M0QZC1 329 aaPredicted RBP14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 IPO5O00410 1097 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 SLITRK3O94933 977 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 KRT18P05783 430 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 RBL2Q08999 1139 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 RNF207Q6ZRF8 634 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 NELFCDQ8IXH7 590 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 PITPNM2Q9BZ72 1349 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 MYH11P35749 1972 aa14.19□□□□□ -0.14
VIPAS39-206ENST00000553888 CASP5P51878 434 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 NOL9Q5SY16 702 aaKnown RBP14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 E4F1Q66K89 784 aaPredicted RBP14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 CATSPERGQ6ZRH7 1159 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 TRMT1LQ7Z2T5 733 aaKnown RBP14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 TMEM139Q8IV31 216 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 BANK1Q8NDB2 785 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 C12orf42Q96LP6 360 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms