RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ADAM17P78536 824 aa10.66□□□□□ -0.7
PRKCH-208ENST00000553846 LAMC2Q13753 1193 aa10.66□□□□□ -0.7
PRKCH-208ENST00000553846 ALX1Q15699 326 aa10.66□□□□□ -0.7
PRKCH-208ENST00000553846 HSDL1Q3SXM5 330 aa10.66□□□□□ -0.7
PRKCH-208ENST00000553846 MYSM1Q5VVJ2 828 aa10.66□□□□□ -0.7
PRKCH-208ENST00000553846 CHST3Q7LGC8 479 aa10.66□□□□□ -0.7
PRKCH-208ENST00000553846 CRIPAKQ8N1N5 446 aa10.66□□□□□ -0.7
PRKCH-208ENST00000553846 NSUN6Q8TEA1 469 aaKnown RBP10.66□□□□□ -0.7
PRKCH-208ENST00000553846 PBXIP1Q96AQ6 731 aa10.66□□□□□ -0.7
PRKCH-208ENST00000553846 ZNF689Q96CS4 500 aaPredicted RBP10.66□□□□□ -0.7
PRKCH-208ENST00000553846 RNF39Q9H2S5 420 aa10.66□□□□□ -0.7
PRKCH-208ENST00000553846 CPVLQ9H3G5 476 aa10.66□□□□□ -0.7
PRKCH-208ENST00000553846 FAM86C1Q9NVL1 165 aa10.66□□□□□ -0.7
PRKCH-208ENST00000553846 CD207Q9UJ71 328 aa10.66□□□□□ -0.7
PRKCH-208ENST00000553846 MYH6P13533 1939 aa10.66□□□□□ -0.7
PRKCH-208ENST00000553846 NCOR2Q9Y618 2525 aa10.65□□□□□ -0.7
PRKCH-208ENST00000553846 LAMA4Q16363 1823 aa10.65□□□□□ -0.7
PRKCH-208ENST00000553846 ADGRA3Q8IWK6 1321 aa10.65□□□□□ -0.7
PRKCH-208ENST00000553846 B4DLN1 442 aa10.65□□□□□ -0.7
PRKCH-208ENST00000553846 RANBP6O60518 1105 aaKnown RBP10.65□□□□□ -0.7
PRKCH-208ENST00000553846 PPFIA4O75335 1185 aa10.65□□□□□ -0.7
PRKCH-208ENST00000553846 CTNNB1P35222 781 aa10.65□□□□□ -0.7
PRKCH-208ENST00000553846 MRPL12P52815 198 aaKnown RBP10.65□□□□□ -0.7
PRKCH-208ENST00000553846 SP2Q02086 613 aa10.65□□□□□ -0.7
PRKCH-208ENST00000553846 COASYQ13057 564 aa10.65□□□□□ -0.7
PRKCH-208ENST00000553846 STXBP2Q15833 593 aa10.65□□□□□ -0.7
PRKCH-208ENST00000553846 USH1GQ495M9 461 aa10.65□□□□□ -0.7
PRKCH-208ENST00000553846 FAM26DQ5JW98 314 aa10.65□□□□□ -0.7
PRKCH-208ENST00000553846 CELF3Q5SZQ8 465 aaKnown RBP10.65□□□□□ -0.7
PRKCH-208ENST00000553846 C11orf84Q9BUA3 381 aaPredicted RBP10.65□□□□□ -0.7
PRKCH-208ENST00000553846 IFIH1Q9BYX4 1025 aaKnown RBP10.65□□□□□ -0.7
PRKCH-208ENST00000553846 PXMP2Q9NR77 195 aa10.65□□□□□ -0.7
PRKCH-208ENST00000553846 ZMYM6O95789 1325 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 SALL3Q9BXA9 1300 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 PLXNA4Q9HCM2 1894 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 TREHO43280 583 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 EIF3JO75822 258 aaKnown RBP10.64□□□□□ -0.71
PRKCH-208ENST00000553846 UBA1P22314 1058 aaKnown RBP10.64□□□□□ -0.71
PRKCH-208ENST00000553846 HSD17B4P51659 736 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 SIGLEC14Q08ET2 396 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 EP400NLQ6ZTU2 488 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 ASCL5Q7RTU5 278 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 ADGRD2Q7Z7M1 963 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 IL31RAQ8NI17 732 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 OTUD7AQ8TE49 926 aaPredicted RBP10.64□□□□□ -0.71
PRKCH-208ENST00000553846 SEPT8Q92599 483 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 RMDN3Q96TC7 470 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 DCTPP1Q9H773 170 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 DOCK5Q9H7D0 1870 aa10.64□□□□□ -0.71
PRKCH-208ENST00000553846 ABCB11O95342 1321 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 TTC41PQ6P2S7 1318 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 UPP2O95045 317 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 NR3C2P08235 984 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 CTSHP09668 335 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 SMIM10L2AP0DMW4 78 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 SMIM10L2BP0DMW5 78 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 EIF2AK2P19525 551 aaKnown RBP10.63□□□□□ -0.71
PRKCH-208ENST00000553846 RRP1P56182 461 aaKnown RBP10.63□□□□□ -0.71
PRKCH-208ENST00000553846 CDC37Q16543 378 aaPredicted RBP10.63□□□□□ -0.71
PRKCH-208ENST00000553846 FIBCD1Q8N539 461 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 EFHBQ8N7U6 833 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 LINC01599Q8WXQ3 324 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 SUSD6Q92537 303 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 APBB2Q92870 758 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 GPKOWQ92917 476 aaPredicted RBP eCLIP10.63□□□□□ -0.71
PRKCH-208ENST00000553846 ATP6V0A1Q93050 837 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 IL17RAQ96F46 866 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 PDCD2LQ9BRP1 358 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 RNPEPQ9H4A4 650 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 BCAS3Q9H6U6 928 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 EHMT1Q9H9B1 1298 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 PLAGL2Q9UPG8 496 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 USP15Q9Y4E8 981 aaPredicted RBP10.63□□□□□ -0.71
PRKCH-208ENST00000553846 MRVI1Q9Y6F6 885 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 CACNA1BQ00975 2339 aa10.63□□□□□ -0.71
PRKCH-208ENST00000553846 EP300Q09472 2414 aaPredicted RBP10.63□□□□□ -0.71
PRKCH-208ENST00000553846 C17orf102A2RUQ5 167 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 CHRNA1P02708 482 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 LGALS2P05162 132 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 GOLGA8HP0CJ92 632 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 MS4A1P11836 297 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 AVPR2P30518 371 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 ICAM3P32942 547 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 MGAT3Q09327 533 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 QRICH1Q2TAL8 776 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 GPATCH4Q5T3I0 446 aaKnown RBP10.62□□□□□ -0.71
PRKCH-208ENST00000553846 STOX1Q6ZVD7 989 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 TBC1D10CQ8IV04 446 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 SUGP1Q8IWZ8 645 aaKnown RBP10.62□□□□□ -0.71
PRKCH-208ENST00000553846 DHX37Q8IY37 1157 aaKnown RBP10.62□□□□□ -0.71
PRKCH-208ENST00000553846 VN1R2Q8NFZ6 395 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 P2RX5Q93086 422 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 SPATA33Q96N06 139 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 TTC14Q96N46 770 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 FSD1Q9BTV5 496 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 PLVAPQ9BX97 442 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 UBA5Q9GZZ9 404 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 RWDD3Q9Y3V2 267 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 CEP250Q9BV73 2442 aa10.62□□□□□ -0.71
PRKCH-208ENST00000553846 PRR23AA6NEV1 266 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms