RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 PES1O00541 588 aaKnown RBP13.52□□□□□ -0.25
SHMT2-207ENST00000553837 NDUFAB1O14561 156 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 ENC1O14682 589 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 ZMYND10O75800 440 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 ATP1A1P05023 1023 aaKnown RBP13.52□□□□□ -0.25
SHMT2-207ENST00000553837 NPR1P16066 1061 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 TNNI2P48788 182 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 SARNPP82979 210 aaKnown RBP13.52□□□□□ -0.25
SHMT2-207ENST00000553837 ATP2B2Q01814 1243 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 NEDD9Q14511 834 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 MIIPQ5JXC2 388 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 ZNF713Q8N859 430 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-207ENST00000553837 CAGE1Q8TC20 777 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 HAS1Q92839 578 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 UIMC1Q96RL1 719 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 TUBGCP2Q9BSJ2 902 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 TTYH3Q9C0H2 523 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 EHD4Q9H223 541 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 RIC8AQ9NPQ8 531 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 AGPAT5Q9NUQ2 364 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 SAMM50Q9Y512 469 aa13.52□□□□□ -0.25
SHMT2-207ENST00000553837 A0A1W2PQC6 194 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 MPHOSPH10O00566 681 aaKnown RBP13.51□□□□□ -0.25
SHMT2-207ENST00000553837 ALS2CLQ60I27 953 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 DYMQ7RTS9 669 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 YTHDF3Q7Z739 585 aaKnown RBP13.51□□□□□ -0.25
SHMT2-207ENST00000553837 GLIS3Q8NEA6 775 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 JAKMIP2Q96AA8 810 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 CNOT6LQ96LI5 555 aaKnown RBP13.51□□□□□ -0.25
SHMT2-207ENST00000553837 DNAJC7Q99615 494 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 SWAP70Q9UH65 585 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 MYH4Q9Y623 1939 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 MYBL2P10244 700 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 CRKP46108 304 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 ORC2Q13416 577 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-207ENST00000553837 HHIPL2Q6UWX4 724 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 ZNF662Q6ZS27 426 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 TEKT1Q969V4 418 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 MTMR8Q96EF0 704 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 CALML4Q96GE6 196 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 CAPZA3Q96KX2 299 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 CAPN11Q9UMQ6 739 aa13.51□□□□□ -0.25
SHMT2-207ENST00000553837 MYH7BA7E2Y1 1941 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 DDTLA6NHG4 134 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-207ENST00000553837 MYO1FO00160 1098 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 SRGAP2O75044 1071 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 MMP10P09238 476 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 KRT83P78385 493 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 TCP10Q12799 353 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 CCDC96Q2M329 555 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 CCDC122Q5T0U0 273 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 SND1Q7KZF4 910 aaKnown RBP eCLIP13.5□□□□□ -0.252e-6■■□□□ 11.8
SHMT2-207ENST00000553837 SV2BQ7L1I2 683 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 SH3BP5LQ7L8J4 393 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 FMNL3Q8IVF7 1028 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 OR8K1Q8NGG5 319 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 RABEP2Q9H5N1 569 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 MYO3BQ8WXR4 1341 aa13.5□□□□□ -0.25
SHMT2-207ENST00000553837 DNM2P50570 870 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 HERVK_113P62684 666 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 BIRC2Q13490 618 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 TSR1Q2NL82 804 aaKnown RBP13.49□□□□□ -0.25
SHMT2-207ENST00000553837 MSL1Q68DK7 614 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-207ENST00000553837 SIAH1Q8IUQ4 282 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 KIAA0825Q8IV33 1275 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 GSPT2Q8IYD1 628 aaKnown RBP13.49□□□□□ -0.25
SHMT2-207ENST00000553837 NLGN1Q8N2Q7 840 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 NOC3LQ8WTT2 800 aaKnown RBP13.49□□□□□ -0.25
SHMT2-207ENST00000553837 LARP4BQ92615 738 aaKnown RBP13.49□□□□□ -0.25
SHMT2-207ENST00000553837 RAD54LQ92698 747 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 ITFG2Q969R8 447 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 RUFY1Q96T51 708 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 PAGR1Q9BTK6 254 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 MAGEC2Q9UBF1 373 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-207ENST00000553837 FAM198AQ9UFP1 575 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 LUC7L2Q9Y383 392 aaKnown RBP13.49□□□□□ -0.25
SHMT2-207ENST00000553837 SCN9AQ15858 1988 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 C10orf71Q711Q0 1435 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 ANO9A1A5B4 782 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 TMCO5BA8MYB1 307 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 USP17L15C9J2P7 530 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 USP17L13C9JLJ4 530 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 USP17L11C9JVI0 530 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 USP17L18D6R9N7 530 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 USP17L22D6RA61 530 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 USP17L17D6RBQ6 530 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 USP17L19D6RCP7 530 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 USP17L20D6RJB6 530 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 ZBTB5O15062 677 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 KRT86O43790 486 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 USP17L24Q0WX57 530 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 TMEM119Q4V9L6 283 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 COBLL1Q53SF7 1204 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 CENPPQ6IPU0 288 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 USP17L6PQ6QN14 398 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 SNX29Q8TEQ0 813 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 ZKSCAN4Q969J2 545 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms