RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 PTPN22Q9Y2R2 807 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 M0QZ92 97 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 PLA2G4BP0C869 781 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 BMP3P12645 472 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 HLFQ16534 295 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 FBXO38Q6PIJ6 1188 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 ATP6V0A1Q93050 837 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 MMS19Q96T76 1030 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 GCNT4Q9P109 453 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 RNF8O76064 485 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 SLC12A2P55011 1212 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 C10orf76Q5T2E6 689 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 KAZNQ674X7 775 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 PHLDB2Q86SQ0 1253 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 ZNF653Q96CK0 615 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 BPIFA3Q9BQP9 254 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 OVOS2A0A0G2JMS6 1433 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 CPDO75976 1380 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 CYB5R4Q7L1T6 521 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 MB21D2Q8IYB1 491 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 TRIM11Q96F44 468 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 PBKQ96KB5 322 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 ADPGKQ9BRR6 497 aa16.68■□□□□ 0.26
ARHGEF40-202ENST00000553709 LRRN2O75325 713 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 GDF11O95390 407 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 LMNB2Q03252 620 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 DHX36Q9H2U1 1008 aaKnown RBP16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 HESX1Q9UBX0 185 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 CDK8P49336 464 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 UBE2SQ16763 222 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 TRIM50Q86XT4 487 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 INTS9Q9NV88 658 aaKnown RBP16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 GFPT2O94808 682 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 BEGAINQ9BUH8 593 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 ALDH8A1Q9H2A2 487 aaPredicted RBP16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 VCXQ9H320 206 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 TMEM206Q9H813 350 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 HACE1Q8IYU2 909 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 PDLIM2Q96JY6 352 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 RIOK1Q9BRS2 568 aaKnown RBP16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 GDAQ9Y2T3 454 aa16.67■□□□□ 0.26
ARHGEF40-202ENST00000553709 PPP2R5AQ15172 486 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 PFDN4Q9NQP4 134 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 PNMA6FA0A0J9YX94 578 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 CUL4BQ13620 913 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 CC2D2BQ6DHV5 1058 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 PPP4R1Q8TF05 950 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 CLRN2A0PK11 232 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 TACO1Q9BSH4 297 aaKnown RBP16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 SEPT9Q9UHD8 586 aaPredicted RBP16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 PCDHB4Q9Y5E5 795 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 HIP1RO75146 1068 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 MAPK4P31152 587 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 PSMD6Q15008 389 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 SYDE2Q5VT97 1194 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 FAM160B1Q5W0V3 765 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 EXOC4Q96A65 974 aa16.66■□□□□ 0.26
ARHGEF40-202ENST00000553709 PLTPP55058 493 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 CASP8Q14790 479 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 KIF2CQ99661 725 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 KCNQ4P56696 695 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 GRAPQ13588 217 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 GRAPLQ8TC17 118 aaPredicted RBP16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 PARVGQ9HBI0 331 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 ATP8A1Q9Y2Q0 1164 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 RCAN1P53805 252 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 DBNDD1Q9H9R9 158 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 ABCB6Q9NP58 842 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 BCS1LQ9Y276 419 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 ADGRB2O60241 1585 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 HSPA6P17066 643 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 STAT2P52630 851 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 CLEC4GQ6UXB4 293 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 TOGARAM2Q6ZUX3 1019 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 LRRC8CQ8TDW0 803 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 PCIF1Q9H4Z3 704 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 KMT5AQ9NQR1 393 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 RIPOR2Q9Y4F9 1068 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 PXDNLA1KZ92 1463 aa16.65■□□□□ 0.26
ARHGEF40-202ENST00000553709 IFNAR2P48551 515 aa16.64■□□□□ 0.26
ARHGEF40-202ENST00000553709 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.26
ARHGEF40-202ENST00000553709 TAB3Q8N5C8 712 aaPredicted RBP16.64■□□□□ 0.26
ARHGEF40-202ENST00000553709 OSBPL5Q9H0X9 879 aaPredicted RBP16.64■□□□□ 0.26
ARHGEF40-202ENST00000553709 LY9Q9HBG7 655 aa16.64■□□□□ 0.26
ARHGEF40-202ENST00000553709 PI4KBQ9UBF8 816 aa16.64■□□□□ 0.26
ARHGEF40-202ENST00000553709 SUN1O94901 812 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 GPR162Q16538 588 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 CDC37Q16543 378 aaPredicted RBP16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 CCDC197Q8NCU1 140 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 FAM81BQ96LP2 452 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 MTA3Q9BTC8 594 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 PNMA6AP0CW24 399 aaPredicted RBP16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 SGO2Q562F6 1265 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 SEPT14Q6ZU15 432 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 NACA2Q9H009 215 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 BCAP29Q9UHQ4 241 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 RRP15Q9Y3B9 282 aaKnown RBP16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 TXNDC9O14530 226 aa16.64■□□□□ 0.25
ARHGEF40-202ENST00000553709 CAPN9O14815 690 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms