RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 QRICH1Q2TAL8 776 aa18.32■□□□□ 0.52
ACTN1-209ENST00000553659 FOXD4L5Q5VV16 416 aaPredicted RBP18.32■□□□□ 0.52
ACTN1-209ENST00000553659 GDF6Q6KF10 455 aaPredicted RBP18.32■□□□□ 0.52
ACTN1-209ENST00000553659 FBXO11Q86XK2 927 aa18.32■□□□□ 0.52
ACTN1-209ENST00000553659 FOXD4L4Q8WXT5 416 aaPredicted RBP18.32■□□□□ 0.52
ACTN1-209ENST00000553659 KAT2BQ92831 832 aa18.32■□□□□ 0.52
ACTN1-209ENST00000553659 MRPL11Q9Y3B7 192 aaKnown RBP18.32■□□□□ 0.52
ACTN1-209ENST00000553659 EPOPA6NHQ4 379 aa18.31■□□□□ 0.52
ACTN1-209ENST00000553659 CDKL5O76039 1030 aa18.31■□□□□ 0.52
ACTN1-209ENST00000553659 PARNO95453 639 aaKnown RBP18.31■□□□□ 0.52
ACTN1-209ENST00000553659 PARP1P09874 1014 aaKnown RBP18.31■□□□□ 0.52
ACTN1-209ENST00000553659 TFF2Q03403 129 aa18.31■□□□□ 0.52
ACTN1-209ENST00000553659 COL9A3Q14050 684 aaPredicted RBP18.31■□□□□ 0.52
ACTN1-209ENST00000553659 GPNMBQ14956 572 aa18.31■□□□□ 0.52
ACTN1-209ENST00000553659 SKIV2LQ15477 1246 aaKnown RBP18.31■□□□□ 0.52
ACTN1-209ENST00000553659 DGKDQ16760 1214 aa18.31■□□□□ 0.52
ACTN1-209ENST00000553659 ARHGEF16Q5VV41 709 aa18.31■□□□□ 0.52
ACTN1-209ENST00000553659 CPLX2Q6PUV4 134 aaKnown RBP18.31■□□□□ 0.52
ACTN1-209ENST00000553659 CHST3Q7LGC8 479 aa18.31■□□□□ 0.52
ACTN1-209ENST00000553659 ENAHQ8N8S7 591 aaPredicted RBP18.31■□□□□ 0.52
ACTN1-209ENST00000553659 NSUN7Q8NE18 718 aaKnown RBP18.31■□□□□ 0.52
ACTN1-209ENST00000553659 LRRC2Q9BYS8 371 aa18.31■□□□□ 0.52
ACTN1-209ENST00000553659 JMJD4Q9H9V9 463 aa18.31■□□□□ 0.52
ACTN1-209ENST00000553659 VAT1LQ9HCJ6 419 aa18.31■□□□□ 0.52
ACTN1-209ENST00000553659 DDX41Q9UJV9 622 aaKnown RBP18.31■□□□□ 0.52
ACTN1-209ENST00000553659 FSD2A1L4K1 749 aa18.3■□□□□ 0.52
ACTN1-209ENST00000553659 H3BQV1 296 aa18.3■□□□□ 0.52
ACTN1-209ENST00000553659 EIF3JO75822 258 aaKnown RBP18.3■□□□□ 0.52
ACTN1-209ENST00000553659 ARHGEF15O94989 841 aa18.3■□□□□ 0.52
ACTN1-209ENST00000553659 SELPP16109 830 aa18.3■□□□□ 0.52
ACTN1-209ENST00000553659 LIFRP42702 1097 aa18.3■□□□□ 0.52
ACTN1-209ENST00000553659 KCNJ6P48051 423 aa18.3■□□□□ 0.52
ACTN1-209ENST00000553659 RCAN1P53805 252 aa18.3■□□□□ 0.52
ACTN1-209ENST00000553659 KRT85P78386 507 aa18.3■□□□□ 0.52
ACTN1-209ENST00000553659 TMTC2Q8N394 836 aa18.3■□□□□ 0.52
ACTN1-209ENST00000553659 ARNTL2Q8WYA1 636 aa18.3■□□□□ 0.52
ACTN1-209ENST00000553659 EMID1Q96A84 441 aaPredicted RBP18.3■□□□□ 0.52
ACTN1-209ENST00000553659 MUC3AQ02505 3323 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 KLF18A0A0U1RQI7 1052 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 SH2B2O14492 632 aaPredicted RBP18.29■□□□□ 0.52
ACTN1-209ENST00000553659 TLL1O43897 1013 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 NR3C2P08235 984 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 EIF2AK2P19525 551 aaKnown RBP18.29■□□□□ 0.52
ACTN1-209ENST00000553659 MRE11P49959 708 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 ANTXR2P58335 489 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 RBL2Q08999 1139 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 LAMC2Q13753 1193 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 ATL3Q6DD88 541 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 LRRC8DQ7L1W4 858 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 SGMS1Q86VZ5 419 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 DHX38Q92620 1227 aaKnown RBP18.29■□□□□ 0.52
ACTN1-209ENST00000553659 KATNAL1Q9BW62 490 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 GZF1Q9H116 711 aaPredicted RBP18.29■□□□□ 0.52
ACTN1-209ENST00000553659 PXMP2Q9NR77 195 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 HDAC6Q9UBN7 1215 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 GTF2IRD1Q9UHL9 959 aa18.29■□□□□ 0.52
ACTN1-209ENST00000553659 REV3LO60673 3130 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 GOLGA8BA8MQT2 603 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 CFBP00751 764 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 CXCL10P02778 98 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 CKBP12277 381 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 PSEN2P49810 448 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 KCNQ1P51787 676 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 ZNF445P59923 1031 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 WDR5P61964 334 aaKnown RBP18.28■□□□□ 0.52
ACTN1-209ENST00000553659 UBE2HP62256 183 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 KRT40Q6A162 431 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 CNKSR3Q6P9H4 555 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 C7orf31Q8N865 590 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 NECAB3Q96P71 396 aaPredicted RBP18.28■□□□□ 0.52
ACTN1-209ENST00000553659 AMNQ9BXJ7 453 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 SCAND2PQ9GZW5 306 aaPredicted RBP18.28■□□□□ 0.52
ACTN1-209ENST00000553659 NAP1L2Q9ULW6 460 aaPredicted RBP18.28■□□□□ 0.52
ACTN1-209ENST00000553659 COG5Q9UP83 839 aa18.28■□□□□ 0.52
ACTN1-209ENST00000553659 ERICH2A1L162 156 aa18.27■□□□□ 0.52
ACTN1-209ENST00000553659 CPLX1O14810 134 aa18.27■□□□□ 0.52
ACTN1-209ENST00000553659 NBNO60934 754 aa18.27■□□□□ 0.52
ACTN1-209ENST00000553659 HSD17B4P51659 736 aa18.27■□□□□ 0.52
ACTN1-209ENST00000553659 GHRHRQ02643 423 aa18.27■□□□□ 0.52
ACTN1-209ENST00000553659 GRB10Q13322 594 aa18.27■□□□□ 0.52
ACTN1-209ENST00000553659 SYNE3Q6ZMZ3 975 aa18.27■□□□□ 0.52
ACTN1-209ENST00000553659 DHX37Q8IY37 1157 aaKnown RBP18.27■□□□□ 0.52
ACTN1-209ENST00000553659 PPTC7Q8NI37 304 aa18.27■□□□□ 0.52
ACTN1-209ENST00000553659 UBAC1Q9BSL1 405 aa18.27■□□□□ 0.52
ACTN1-209ENST00000553659 ALG1Q9BT22 464 aa18.27■□□□□ 0.52
ACTN1-209ENST00000553659 MAP3K20Q9NYL2 800 aaKnown RBP18.27■□□□□ 0.52
ACTN1-209ENST00000553659 MRVI1Q9Y6F6 885 aa18.27■□□□□ 0.52
ACTN1-209ENST00000553659 COL4A4P53420 1690 aaPredicted RBP18.27■□□□□ 0.52
ACTN1-209ENST00000553659 NID2Q14112 1375 aa18.27■□□□□ 0.51
ACTN1-209ENST00000553659 BAZ2BQ9UIF8 2168 aaKnown RBP18.27■□□□□ 0.51
ACTN1-209ENST00000553659 TRANK1O15050 2925 aa18.26■□□□□ 0.51
ACTN1-209ENST00000553659 ABHD14A-ACY1A0A1B0GW23 586 aa18.26■□□□□ 0.51
ACTN1-209ENST00000553659 HAS3O00219 553 aa18.26■□□□□ 0.51
ACTN1-209ENST00000553659 OPLAHO14841 1288 aa18.26■□□□□ 0.51
ACTN1-209ENST00000553659 JAK2O60674 1132 aa18.26■□□□□ 0.51
ACTN1-209ENST00000553659 LETM1O95202 739 aaPredicted RBP18.26■□□□□ 0.51
ACTN1-209ENST00000553659 F2P00734 622 aa18.26■□□□□ 0.51
ACTN1-209ENST00000553659 PTK7Q13308 1070 aa18.26■□□□□ 0.51
ACTN1-209ENST00000553659 MFSD10Q14728 455 aa18.26■□□□□ 0.51
ACTN1-209ENST00000553659 KIAA0753Q2KHM9 967 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms