RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 OTOP2Q7RTS6 562 aa8.7□□□□□ -1.02
ATXN3-219ENST00000553488 TLK2Q86UE8 772 aa8.7□□□□□ -1.02
ATXN3-219ENST00000553488 SIRT2Q8IXJ6 389 aa8.7□□□□□ -1.02
ATXN3-219ENST00000553488 AMOTL1Q8IY63 956 aa8.7□□□□□ -1.02
ATXN3-219ENST00000553488 CPXCR1Q8N123 301 aa8.7□□□□□ -1.02
ATXN3-219ENST00000553488 CHST13Q8NET6 341 aa8.7□□□□□ -1.02
ATXN3-219ENST00000553488 KIF1BPQ96EK5 621 aa8.7□□□□□ -1.02
ATXN3-219ENST00000553488 HAUS7Q99871 368 aa8.7□□□□□ -1.02
ATXN3-219ENST00000553488 MTIF3Q9H2K0 278 aaKnown RBP8.7□□□□□ -1.02
ATXN3-219ENST00000553488 BOLA2Q9H3K6 86 aa8.7□□□□□ -1.02
ATXN3-219ENST00000553488 RAVER2Q9HCJ3 691 aaKnown RBP8.7□□□□□ -1.02
ATXN3-219ENST00000553488 CUEDC1Q9NWM3 386 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-219ENST00000553488 FBXO40Q9UH90 709 aa8.7□□□□□ -1.02
ATXN3-219ENST00000553488 DYRK1BQ9Y463 629 aa8.7□□□□□ -1.02
ATXN3-219ENST00000553488 PCDHA11Q9Y5I1 949 aa8.7□□□□□ -1.02
ATXN3-219ENST00000553488 SLC4A4Q9Y6R1 1079 aa8.7□□□□□ -1.02
ATXN3-219ENST00000553488 EPOPA6NHQ4 379 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 CCER2I3L3R5 266 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 ERC2O15083 957 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 CABYRO75952 493 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 ARHGEF15O94989 841 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 IFIT2P09913 472 aaKnown RBP8.69□□□□□ -1.02
ATXN3-219ENST00000553488 ATP5JP18859 108 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 POU3F3P20264 500 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-219ENST00000553488 ITGA7Q13683 1181 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 NCOA4Q13772 614 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 FSCN1Q16658 493 aaKnown RBP8.69□□□□□ -1.02
ATXN3-219ENST00000553488 SBK1Q52WX2 424 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 PLEKHM2Q8IWE5 1019 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 ANKRD35Q8N283 1001 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 VTI1AQ96AJ9 217 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 C1QTNF1Q9BXJ1 281 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.69□□□□□ -1.02
ATXN3-219ENST00000553488 TRPV6Q9H1D0 765 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 EPB41L4AQ9HCS5 686 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-219ENST00000553488 A1CFQ9NQ94 594 aaKnown RBP8.69□□□□□ -1.02
ATXN3-219ENST00000553488 SYNPO2Q9UMS6 1093 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 MTCH2Q9Y6C9 303 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 DDX49Q9Y6V7 483 aaKnown RBP8.69□□□□□ -1.02
ATXN3-219ENST00000553488 ZNF536O15090 1300 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 ZNF318Q5VUA4 2279 aa8.69□□□□□ -1.02
ATXN3-219ENST00000553488 ATG2AQ2TAZ0 1938 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 GSG1L2A8MUP6 293 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 ZBED4O75132 1171 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 GDF10P55107 478 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 INSM1Q01101 510 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-219ENST00000553488 TNFAIP2Q03169 654 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 TTLL4Q14679 1199 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 EML3Q32P44 896 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 TMEM63BQ5T3F8 832 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 ZNF295-AS1Q8N0V1 137 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 LRRC47Q8N1G4 583 aaKnown RBP8.68□□□□□ -1.02
ATXN3-219ENST00000553488 MICALL1Q8N3F8 863 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 GMCL1P1Q8NEA9 526 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 PANK1Q8TE04 598 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 MKL1Q969V6 931 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 CEP95Q96GE4 821 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 SCLYQ96I15 445 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 STRBPQ96SI9 672 aaKnown RBP8.68□□□□□ -1.02
ATXN3-219ENST00000553488 SEZ6LQ9BYH1 1024 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 ACAD9Q9H845 621 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 C11orf16Q9NQ32 467 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 HOMER2Q9NSB8 354 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 FEM1BQ9UK73 627 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 SLC4A7Q9Y6M7 1214 aa8.68□□□□□ -1.02
ATXN3-219ENST00000553488 USP34Q70CQ2 3546 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 RFXAPO00287 272 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 ATP9BO43861 1147 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 CA3P07451 260 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 ATP2A2P16615 1042 aaKnown RBP8.67□□□□□ -1.02
ATXN3-219ENST00000553488 PSMC6P62333 389 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 KIAA1217Q5T5P2 1943 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 KRT40Q6A162 431 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 TAPT1Q6NXT6 567 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 GIMAP6Q6P9H5 292 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 MICAL3Q7RTP6 2002 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 TAS1R3Q7RTX0 852 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 FBXO16Q8IX29 292 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-219ENST00000553488 RPAP2Q8IXW5 612 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-219ENST00000553488 MORC4Q8TE76 937 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 GLMNQ92990 594 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 ZSCAN10Q96SZ4 725 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-219ENST00000553488 LRFN3Q9BTN0 628 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 ALDH8A1Q9H2A2 487 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-219ENST00000553488 EPHX3Q9H6B9 360 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 PDGFCQ9NRA1 345 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 RNF146Q9NTX7 359 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 MTMR4Q9NYA4 1195 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 CLIP2Q9UDT6 1046 aa8.67□□□□□ -1.02
ATXN3-219ENST00000553488 ASB14A6NK59 587 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 RAB11FIP3O75154 756 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 PRDM1O75626 825 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 TTLL1O95922 423 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 PFKMP08237 780 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 BMP3P12645 472 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 AAK1Q2M2I8 961 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 RASGRP2Q7LDG7 609 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 SPRED2Q7Z698 418 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 RPUSD2Q8IZ73 545 aaKnown RBP8.66□□□□□ -1.02
ATXN3-219ENST00000553488 STK11IPQ8N1F8 1099 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms