RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 HIPK3Q9H422 1215 aa9.45□□□□□ -0.9
PCNX1-204ENST00000553428 UPF2Q9HAU5 1272 aaKnown RBP9.45□□□□□ -0.9
PCNX1-204ENST00000553428 TMEM260Q9NX78 707 aa9.45□□□□□ -0.9
PCNX1-204ENST00000553428 ZNF215Q9UL58 517 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-204ENST00000553428 NFASCO94856 1347 aa9.45□□□□□ -0.9
PCNX1-204ENST00000553428 CEP290O15078 2479 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 H3BRB1 525 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 PITPNM1O00562 1244 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 PARNO95453 639 aaKnown RBP9.44□□□□□ -0.9
PCNX1-204ENST00000553428 LGALS2P05162 132 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 PFKMP08237 780 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 ZNF76P36508 570 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 RBM25P49756 843 aaKnown RBP9.44□□□□□ -0.9
PCNX1-204ENST00000553428 SETQ01105 290 aaPredicted RBP9.44□□□□□ -0.9
PCNX1-204ENST00000553428 RBL2Q08999 1139 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 BFSP2Q13515 415 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 PTGISQ16647 500 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 KIAA0753Q2KHM9 967 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 CAGE1Q8TC20 777 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 SEPT1Q8WYJ6 367 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 SDF4Q9BRK5 362 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 TUT1Q9H6E5 874 aaKnown RBP9.44□□□□□ -0.9
PCNX1-204ENST00000553428 KCNH7Q9NS40 1196 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 TRMT13Q9NUP7 481 aaKnown RBP9.44□□□□□ -0.9
PCNX1-204ENST00000553428 VPS54Q9P1Q0 977 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 GTF2IRD1Q9UHL9 959 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 PCDHA4Q9UN74 947 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 NOD1Q9Y239 953 aa9.44□□□□□ -0.9
PCNX1-204ENST00000553428 CENPFP49454 3210 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 TNRC18O15417 2968 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-204ENST00000553428 SCN10AQ9Y5Y9 1956 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 ATP9AO75110 1047 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 ZNF286BP0CG31 522 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 GNAT1P11488 350 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 RFC2P35250 354 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 USP11P51784 963 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 PTK7Q13308 1070 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 ME3Q16798 604 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 PSRC1Q6PGN9 363 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-204ENST00000553428 PLA2G4DQ86XP0 818 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 RPUSD2Q8IZ73 545 aaKnown RBP9.43□□□□□ -0.9
PCNX1-204ENST00000553428 BLIDQ8IZY5 108 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 RETREG2Q8NC44 543 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 TNPO1Q92973 898 aaKnown RBP9.43□□□□□ -0.9
PCNX1-204ENST00000553428 GTF3C6Q969F1 213 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 PGBD1Q96JS3 809 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 ZSCAN31Q96LW9 406 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-204ENST00000553428 ALG1Q9BT22 464 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 PPP1R12CQ9BZL4 782 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 MTIF3Q9H2K0 278 aaKnown RBP9.43□□□□□ -0.9
PCNX1-204ENST00000553428 JPH1Q9HDC5 661 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-204ENST00000553428 IL23AQ9NPF7 189 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 ORC3Q9UBD5 711 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-204ENST00000553428 HDAC6Q9UBN7 1215 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 SLC9A2Q9UBY0 812 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 LIMCH1Q9UPQ0 1083 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 KIAA1217Q5T5P2 1943 aa9.43□□□□□ -0.9
PCNX1-204ENST00000553428 EMSYQ7Z589 1322 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 C17orf102A2RUQ5 167 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 FAM86B1E9PN63 330 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 M0R2N6 131 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 SORBS3O60504 671 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 PPFIA3O75145 1194 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 FAM86B2P0C5J1 330 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 CYP2C9P11712 490 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 CSF2RAP15509 400 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 HOXC8P31273 242 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 CYP2C18P33260 490 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 TCF7P36402 384 aaPredicted RBP9.42□□□□□ -0.9
PCNX1-204ENST00000553428 RABEP1Q15276 862 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 SHHQ15465 462 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 GDF6Q6KF10 455 aaPredicted RBP9.42□□□□□ -0.9
PCNX1-204ENST00000553428 MOXD1Q6UVY6 613 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 KRT25Q7Z3Z0 450 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 CYP2W1Q8TAV3 490 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 AFAP1L1Q8TED9 768 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 PHF20Q9BVI0 1012 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 SMARCAD1Q9H4L7 1026 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 BCAS3Q9H6U6 928 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 AGO4Q9HCK5 861 aaKnown RBP9.42□□□□□ -0.9
PCNX1-204ENST00000553428 SH2B1Q9NRF2 756 aaPredicted RBP9.42□□□□□ -0.9
PCNX1-204ENST00000553428 TBC1D22BQ9NU19 505 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 TCEAL9Q9UHQ7 104 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 LTBP2Q14767 1821 aa9.42□□□□□ -0.9
PCNX1-204ENST00000553428 NRCAMQ92823 1304 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 IGLV3-22A0A075B6J6 115 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 GSTTP1A0A1W2PQM5 241 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 CAND2O75155 1236 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 LGR5O75473 907 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 ATG7O95352 703 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 SLC34A2O95436 690 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 CTDNEP1O95476 244 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 FGBP02675 491 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 ARP10275 920 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 SLC26A2P50443 739 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 CHMP4BP1P59074 171 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 SMAD3P84022 425 aaKnown RBP9.41□□□□□ -0.9
PCNX1-204ENST00000553428 SP4Q02446 784 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 NONOQ15233 471 aaKnown RBP eCLIP9.41□□□□□ -0.9
PCNX1-204ENST00000553428 NPY5RQ15761 445 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms