RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 NOD1Q9Y239 953 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 FARP1Q9Y4F1 1045 aaPredicted RBP11.68□□□□□ -0.54
LINC00517-201ENST00000553396 TELO2Q9Y4R8 837 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 KAT6AQ92794 2004 aa11.68□□□□□ -0.54
LINC00517-201ENST00000553396 F2P00734 622 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 FOSP01100 380 aaPredicted RBP11.67□□□□□ -0.54
LINC00517-201ENST00000553396 SUPT20HL2P0C7V6 817 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 ACRP10323 421 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 HOXD8P13378 290 aaPredicted RBP11.67□□□□□ -0.54
LINC00517-201ENST00000553396 CLK2P49760 499 aaKnown RBP11.67□□□□□ -0.54
LINC00517-201ENST00000553396 SSRP1Q08945 709 aaKnown RBP11.67□□□□□ -0.54
LINC00517-201ENST00000553396 AP3B2Q13367 1082 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 PPIGQ13427 754 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC00517-201ENST00000553396 MTMR1Q13613 665 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 PTGISQ16647 500 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 LRIT3Q3SXY7 679 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 METTL7BQ6UX53 244 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 TRIM22Q8IYM9 498 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 TMEM199Q8N511 208 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 C7orf31Q8N865 590 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 RASGRP4Q8TDF6 673 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 CCDC12Q8WUD4 166 aaPredicted RBP11.67□□□□□ -0.54
LINC00517-201ENST00000553396 SCLYQ96I15 445 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 RNPC3Q96LT9 517 aaKnown RBP11.67□□□□□ -0.54
LINC00517-201ENST00000553396 KATNAL1Q9BW62 490 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 GLT8D2Q9H1C3 349 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 WNT8AQ9H1J5 351 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 C6orf50Q9HD87 102 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 TPCN1Q9ULQ1 816 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 UBIAD1Q9Y5Z9 338 aa11.67□□□□□ -0.54
LINC00517-201ENST00000553396 ESYT2A0FGR8 921 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 EIF5BO60841 1220 aaKnown RBP11.66□□□□□ -0.54
LINC00517-201ENST00000553396 DTNBO60941 627 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 ATP9AO75110 1047 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 PPFIA4O75335 1185 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 LGALS2P05162 132 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 KCNA2P16389 499 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 AK2P54819 239 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 PTPN11Q06124 597 aaPredicted RBP11.66□□□□□ -0.54
LINC00517-201ENST00000553396 SCRN1Q12765 414 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 C8orf34Q49A92 452 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 UTP14CQ5TAP6 766 aaKnown RBP11.66□□□□□ -0.54
LINC00517-201ENST00000553396 GDF6Q6KF10 455 aaPredicted RBP11.66□□□□□ -0.54
LINC00517-201ENST00000553396 TRIM50Q86XT4 487 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 REXO1Q8N1G1 1221 aaKnown RBP11.66□□□□□ -0.54
LINC00517-201ENST00000553396 CCDC148Q8NFR7 591 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 CYP2W1Q8TAV3 490 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 CDHR1Q96JP9 859 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 GPR20Q99678 358 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00517-201ENST00000553396 C16orf70Q9BSU1 422 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 ZMYND12Q9H0C1 365 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 SLKQ9H2G2 1235 aaPredicted RBP11.66□□□□□ -0.54
LINC00517-201ENST00000553396 JADE2Q9NQC1 790 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 HDAC6Q9UBN7 1215 aa11.66□□□□□ -0.54
LINC00517-201ENST00000553396 TET1Q8NFU7 2136 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 HAS3O00219 553 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 GNA11P29992 359 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 ZNF76P36508 570 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 SREBF1P36956 1147 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 ARHGAP4P98171 946 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 CPLX2Q6PUV4 134 aaKnown RBP11.65□□□□□ -0.54
LINC00517-201ENST00000553396 C16orf59Q7L2K0 433 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 SESTD1Q86VW0 696 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 GIMAP8Q8ND71 665 aaPredicted RBP11.65□□□□□ -0.54
LINC00517-201ENST00000553396 AIFM3Q96NN9 605 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 CTAGE1Q96RT6 745 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 SENP7Q9BQF6 1050 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 MXRA8Q9BRK3 442 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 KCNH7Q9NS40 1196 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 GTF2IRD1Q9UHL9 959 aa11.65□□□□□ -0.54
LINC00517-201ENST00000553396 H3BRB1 525 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 PFKFB2O60825 505 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 DEXIO95424 95 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 LARGE1O95461 756 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 ARP10275 920 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 TCF7P36402 384 aaPredicted RBP11.64□□□□□ -0.55
LINC00517-201ENST00000553396 NEK4P51957 841 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 NLRP5P59047 1200 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 ZNF200P98182 395 aaPredicted RBP11.64□□□□□ -0.55
LINC00517-201ENST00000553396 HIC1Q14526 733 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 ANKRD1Q15327 319 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 CEP55Q53EZ4 464 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 TMEM240Q5SV17 173 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 PSRC1Q6PGN9 363 aaPredicted RBP11.64□□□□□ -0.55
LINC00517-201ENST00000553396 ZNF365Q70YC5 407 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 DEFB128Q7Z7B8 93 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 TEX2Q8IWB9 1127 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 UIMC1Q96RL1 719 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 TUT1Q9H6E5 874 aaKnown RBP11.64□□□□□ -0.55
LINC00517-201ENST00000553396 IL23AQ9NPF7 189 aa11.64□□□□□ -0.55
LINC00517-201ENST00000553396 GBF1Q92538 1859 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 FAM86B1E9PN63 330 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 RBAK-RBAKDNI3L0D1 243 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 DDX39AO00148 427 aaKnown RBP11.63□□□□□ -0.55
LINC00517-201ENST00000553396 CDKL5O76039 1030 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 FAM86B2P0C5J1 330 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 SMIM10L2AP0DMW4 78 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 SMIM10L2BP0DMW5 78 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 BFSP2Q13515 415 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms