RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 C22orf23Q9BZE7 217 aa17.5■□□□□ 0.39
SHMT2-204ENST00000553324 PPP1R12CQ9BZL4 782 aa17.5■□□□□ 0.39
SHMT2-204ENST00000553324 KIAA1217Q5T5P2 1943 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 H3BRB1 525 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 MEIS1O00470 390 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 SORBS3O60504 671 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 KCNA2P16389 499 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 BFSP2Q13515 415 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 PTGISQ16647 500 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 C8orf34Q49A92 452 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 GPR153Q6NV75 609 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 CCDC155Q8N6L0 562 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 RETREG2Q8NC44 543 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 SEPT1Q8WYJ6 367 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 SDF4Q9BRK5 362 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 C16orf70Q9BSU1 422 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 NOC4LQ9BVI4 516 aaKnown RBP17.49■□□□□ 0.39
SHMT2-204ENST00000553324 TUT1Q9H6E5 874 aaKnown RBP17.49■□□□□ 0.39
SHMT2-204ENST00000553324 KCNH7Q9NS40 1196 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 TMEM260Q9NX78 707 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 VPS54Q9P1Q0 977 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 GTF2IRD1Q9UHL9 959 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 ZNF215Q9UL58 517 aaPredicted RBP17.49■□□□□ 0.39
SHMT2-204ENST00000553324 LAMA3Q16787 3333 aa17.49■□□□□ 0.39
SHMT2-204ENST00000553324 PITPNM1O00562 1244 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 ATP9AO75110 1047 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 PPFIA3O75145 1194 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 ZNF286BP0CG31 522 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 GNAT1P11488 350 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 CYP2C18P33260 490 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 SHHQ15465 462 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 IL27Q8NEV9 243 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 CAGE1Q8TC20 777 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 WASF1Q92558 559 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 PGBD1Q96JS3 809 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 ALG1Q9BT22 464 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 BCAS3Q9H6U6 928 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
SHMT2-204ENST00000553324 HDAC6Q9UBN7 1215 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 TRIOBPQ9H2D6 2365 aa17.48■□□□□ 0.39
SHMT2-204ENST00000553324 NFASCO94856 1347 aa17.47■□□□□ 0.39
SHMT2-204ENST00000553324 LGALS2P05162 132 aa17.47■□□□□ 0.39
SHMT2-204ENST00000553324 CYP2C9P11712 490 aa17.47■□□□□ 0.39
SHMT2-204ENST00000553324 CSF2RAP15509 400 aa17.47■□□□□ 0.39
SHMT2-204ENST00000553324 PSRC1Q6PGN9 363 aaPredicted RBP17.47■□□□□ 0.39
SHMT2-204ENST00000553324 TNPO1Q92973 898 aaKnown RBP17.47■□□□□ 0.39
SHMT2-204ENST00000553324 JPH1Q9HDC5 661 aaPredicted RBP17.47■□□□□ 0.39
SHMT2-204ENST00000553324 IL23AQ9NPF7 189 aa17.47■□□□□ 0.39
SHMT2-204ENST00000553324 PCDH10Q9P2E7 1040 aa17.47■□□□□ 0.39
SHMT2-204ENST00000553324 PCDHA4Q9UN74 947 aa17.47■□□□□ 0.39
SHMT2-204ENST00000553324 STK36Q9NRP7 1315 aa17.47■□□□□ 0.39
SHMT2-204ENST00000553324 PARNO95453 639 aaKnown RBP17.46■□□□□ 0.39
SHMT2-204ENST00000553324 PFKMP08237 780 aa17.46■□□□□ 0.39
SHMT2-204ENST00000553324 RFC2P35250 354 aa17.46■□□□□ 0.39
SHMT2-204ENST00000553324 USP11P51784 963 aa17.46■□□□□ 0.39
SHMT2-204ENST00000553324 CCL23P55773 120 aa17.46■□□□□ 0.39
SHMT2-204ENST00000553324 SETQ01105 290 aaPredicted RBP17.46■□□□□ 0.39
SHMT2-204ENST00000553324 GDF6Q6KF10 455 aaPredicted RBP17.46■□□□□ 0.39
SHMT2-204ENST00000553324 CYP2W1Q8TAV3 490 aa17.46■□□□□ 0.39
SHMT2-204ENST00000553324 CRYGNQ8WXF5 182 aa17.46■□□□□ 0.39
SHMT2-204ENST00000553324 RNPC3Q96LT9 517 aaKnown RBP17.46■□□□□ 0.39
SHMT2-204ENST00000553324 MTIF3Q9H2K0 278 aaKnown RBP17.46■□□□□ 0.39
SHMT2-204ENST00000553324 AGO4Q9HCK5 861 aaKnown RBP17.46■□□□□ 0.39
SHMT2-204ENST00000553324 SLC9A2Q9UBY0 812 aa17.46■□□□□ 0.39
SHMT2-204ENST00000553324 SCN10AQ9Y5Y9 1956 aa17.46■□□□□ 0.39
SHMT2-204ENST00000553324 C17orf102A2RUQ5 167 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 SLC34A2O95436 690 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 ARP10275 920 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 CIITAP33076 1130 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 TCF7P36402 384 aaPredicted RBP17.45■□□□□ 0.38
SHMT2-204ENST00000553324 EPHB4P54760 987 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 SP4Q02446 784 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 PTK7Q13308 1070 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 ME3Q16798 604 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 C9orf50Q5SZB4 431 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 UTP14CQ5TAP6 766 aaKnown RBP17.45■□□□□ 0.38
SHMT2-204ENST00000553324 PLA2G4DQ86XP0 818 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 BLIDQ8IZY5 108 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 DAGLBQ8NCG7 672 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 GTF3C6Q969F1 213 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 SMARCAD1Q9H4L7 1026 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 ERAP1Q9NZ08 941 aa17.45■□□□□ 0.38
SHMT2-204ENST00000553324 FAM86B1E9PN63 330 aa17.44■□□□□ 0.38
SHMT2-204ENST00000553324 FGBP02675 491 aa17.44■□□□□ 0.38
SHMT2-204ENST00000553324 FAM86B2P0C5J1 330 aa17.44■□□□□ 0.38
SHMT2-204ENST00000553324 RBM25P49756 843 aaKnown RBP17.44■□□□□ 0.38
SHMT2-204ENST00000553324 TMEM240Q5SV17 173 aa17.44■□□□□ 0.38
SHMT2-204ENST00000553324 AFAP1L1Q8TED9 768 aa17.44■□□□□ 0.38
SHMT2-204ENST00000553324 AZI2Q9H6S1 392 aa17.44■□□□□ 0.38
SHMT2-204ENST00000553324 TBC1D22BQ9NU19 505 aa17.44■□□□□ 0.38
SHMT2-204ENST00000553324 PKD2L1Q9P0L9 805 aa17.44■□□□□ 0.38
SHMT2-204ENST00000553324 ORC3Q9UBD5 711 aaPredicted RBP17.44■□□□□ 0.38
SHMT2-204ENST00000553324 LIMCH1Q9UPQ0 1083 aa17.44■□□□□ 0.38
SHMT2-204ENST00000553324 GSTTP1A0A1W2PQM5 241 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 IQCF3P0C7M6 154 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 SMIM10L2AP0DMW4 78 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 SMIM10L2BP0DMW5 78 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 RBL2Q08999 1139 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 ZNF365Q70YC5 407 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 C16orf59Q7L2K0 433 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms