RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 ZFP91Q96JP5 570 aaPredicted RBP15.13■□□□□ 0.01
VPS29-211ENST00000553128 MSLNLQ96KJ4 702 aa15.13■□□□□ 0.01
VPS29-211ENST00000553128 SPATA33Q96N06 139 aa15.13■□□□□ 0.01
VPS29-211ENST00000553128 DCTPP1Q9H773 170 aa15.13■□□□□ 0.01
VPS29-211ENST00000553128 PXMP2Q9NR77 195 aa15.13■□□□□ 0.01
VPS29-211ENST00000553128 PPFIA4O75335 1185 aa15.12■□□□□ 0.01
VPS29-211ENST00000553128 SMIM10L2AP0DMW4 78 aa15.12■□□□□ 0.01
VPS29-211ENST00000553128 SMIM10L2BP0DMW5 78 aa15.12■□□□□ 0.01
VPS29-211ENST00000553128 ADAM15Q13444 863 aa15.12■□□□□ 0.01
VPS29-211ENST00000553128 CELF3Q5SZQ8 465 aaKnown RBP15.12■□□□□ 0.01
VPS29-211ENST00000553128 RNPEPQ9H4A4 650 aa15.12■□□□□ 0.01
VPS29-211ENST00000553128 RC3H2Q9HBD1 1191 aaKnown RBP15.12■□□□□ 0.01
VPS29-211ENST00000553128 CLEC1BQ9P126 229 aa15.12■□□□□ 0.01
VPS29-211ENST00000553128 SUPT16HQ9Y5B9 1047 aaKnown RBP15.12■□□□□ 0.01
VPS29-211ENST00000553128 ABCB11O95342 1321 aa15.12■□□□□ 0.01
VPS29-211ENST00000553128 MYH7BA7E2Y1 1941 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 LOC730098B7Z3J9 87 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 OPLAHO14841 1288 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 GGPS1O95749 300 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 FGAP02671 866 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 RB1P06400 928 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 DNAJB1P25685 340 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 HAND2P61296 217 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 ADGRD2Q7Z7M1 963 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 SUGP1Q8IWZ8 645 aaKnown RBP15.11■□□□□ 0.01
VPS29-211ENST00000553128 ADGRF4Q8IZF3 695 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 FBXL6Q8N531 539 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 IL31RAQ8NI17 732 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 ZKSCAN3Q9BRR0 538 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 C11orf84Q9BUA3 381 aaPredicted RBP15.11■□□□□ 0.01
VPS29-211ENST00000553128 LMAN2LQ9H0V9 348 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 TTC41PQ6P2S7 1318 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 ZDBF2Q9HCK1 2354 aa15.11■□□□□ 0.01
VPS29-211ENST00000553128 EYA4O95677 639 aa15.1■□□□□ 0.01
VPS29-211ENST00000553128 MYCLP12524 364 aaPredicted RBP15.1■□□□□ 0.01
VPS29-211ENST00000553128 UBA1P22314 1058 aaKnown RBP15.1■□□□□ 0.01
VPS29-211ENST00000553128 NDUFV1P49821 464 aa15.1■□□□□ 0.01
VPS29-211ENST00000553128 RRP1P56182 461 aaKnown RBP15.1■□□□□ 0.01
VPS29-211ENST00000553128 ALX1Q15699 326 aa15.1■□□□□ 0.01
VPS29-211ENST00000553128 QRICH1Q2TAL8 776 aa15.1■□□□□ 0.01
VPS29-211ENST00000553128 GPATCH4Q5T3I0 446 aaKnown RBP15.1■□□□□ 0.01
VPS29-211ENST00000553128 CLP1Q92989 425 aaKnown RBP15.1■□□□□ 0.01
VPS29-211ENST00000553128 TELO2Q9Y4R8 837 aa15.1■□□□□ 0.01
VPS29-211ENST00000553128 ADGRA3Q8IWK6 1321 aa15.1■□□□□ 0.01
VPS29-211ENST00000553128 H3BRB1 525 aa15.09■□□□□ 0.01
VPS29-211ENST00000553128 CFBP00751 764 aa15.09■□□□□ 0.01
VPS29-211ENST00000553128 MMP1P03956 469 aa15.09■□□□□ 0.01
VPS29-211ENST00000553128 LGALS2P05162 132 aa15.09■□□□□ 0.01
VPS29-211ENST00000553128 MCF2L2Q86YR7 1114 aa15.09■□□□□ 0.01
VPS29-211ENST00000553128 TBC1D10CQ8IV04 446 aa15.09■□□□□ 0.01
VPS29-211ENST00000553128 SMRP1Q8NCR6 262 aa15.09■□□□□ 0.01
VPS29-211ENST00000553128 ASIC4Q96FT7 647 aa15.09■□□□□ 0.01
VPS29-211ENST00000553128 TTC14Q96N46 770 aa15.09■□□□□ 0.01
VPS29-211ENST00000553128 PRRX2Q99811 253 aa15.09■□□□□ 0.01
VPS29-211ENST00000553128 PDCD2LQ9BRP1 358 aa15.09■□□□□ 0.01
VPS29-211ENST00000553128 TUT1Q9H6E5 874 aaKnown RBP15.09■□□□□ 0.01
VPS29-211ENST00000553128 SETD4Q9NVD3 440 aa15.09■□□□□ 0.01
VPS29-211ENST00000553128 PCDHGC5Q9Y5F6 944 aa15.09■□□□□ 0.01
VPS29-211ENST00000553128 GLP2RO95838 553 aa15.08■□□□□ 0
VPS29-211ENST00000553128 HSPD1P10809 573 aaKnown RBP15.08■□□□□ 0
VPS29-211ENST00000553128 CBX2Q14781 532 aaPredicted RBP15.08■□□□□ 0
VPS29-211ENST00000553128 MIER1Q8N108 512 aa15.08■□□□□ 0
VPS29-211ENST00000553128 ATOH1Q92858 354 aaPredicted RBP15.08■□□□□ 0
VPS29-211ENST00000553128 APBB2Q92870 758 aa15.08■□□□□ 0
VPS29-211ENST00000553128 ZNF689Q96CS4 500 aaPredicted RBP15.08■□□□□ 0
VPS29-211ENST00000553128 FAM227BQ96M60 508 aa15.08■□□□□ 0
VPS29-211ENST00000553128 MAF1Q9H063 256 aa15.08■□□□□ 0
VPS29-211ENST00000553128 JMJD4Q9H9V9 463 aa15.08■□□□□ 0
VPS29-211ENST00000553128 VAT1LQ9HCJ6 419 aa15.08■□□□□ 0
VPS29-211ENST00000553128 BARX2Q9UMQ3 279 aaPredicted RBP15.08■□□□□ 0
VPS29-211ENST00000553128 PLAGL2Q9UPG8 496 aa15.08■□□□□ 0
VPS29-211ENST00000553128 MRPL11Q9Y3B7 192 aaKnown RBP15.08■□□□□ 0
VPS29-211ENST00000553128 PLXNA3P51805 1871 aa15.08■□□□□ 0
VPS29-211ENST00000553128 CACNA1HO95180 2353 aa15.07■□□□□ 0
VPS29-211ENST00000553128 SPTBN4Q9H254 2564 aa15.07■□□□□ 0
VPS29-211ENST00000553128 A0A0D9SFI3 127 aa15.07■□□□□ 0
VPS29-211ENST00000553128 H0Y858 1186 aa15.07■□□□□ 0
VPS29-211ENST00000553128 CAND2O75155 1236 aa15.07■□□□□ 0
VPS29-211ENST00000553128 PDGFBP01127 241 aaPredicted RBP15.07■□□□□ 0
VPS29-211ENST00000553128 CHRNA1P02708 482 aa15.07■□□□□ 0
VPS29-211ENST00000553128 GHRP10912 638 aa15.07■□□□□ 0
VPS29-211ENST00000553128 AVPR2P30518 371 aa15.07■□□□□ 0
VPS29-211ENST00000553128 HOXA13P31271 388 aaPredicted RBP15.07■□□□□ 0
VPS29-211ENST00000553128 HSD17B4P51659 736 aa15.07■□□□□ 0
VPS29-211ENST00000553128 RBM10P98175 930 aaKnown RBP15.07■□□□□ 0
VPS29-211ENST00000553128 SIGLEC14Q08ET2 396 aa15.07■□□□□ 0
VPS29-211ENST00000553128 PKN1Q16512 942 aa15.07■□□□□ 0
VPS29-211ENST00000553128 ASCL5Q7RTU5 278 aa15.07■□□□□ 0
VPS29-211ENST00000553128 RBM23Q86U06 439 aaKnown RBP15.07■□□□□ 0
VPS29-211ENST00000553128 TRIM50Q86XT4 487 aa15.07■□□□□ 0
VPS29-211ENST00000553128 CHMP4BQ9H444 224 aaKnown RBP15.07■□□□□ 0
VPS29-211ENST00000553128 TLR9Q9NR96 1032 aa15.07■□□□□ 0
VPS29-211ENST00000553128 USP15Q9Y4E8 981 aaPredicted RBP15.07■□□□□ 0
VPS29-211ENST00000553128 NEDD4P46934 1319 aa15.07■□□□□ 0
VPS29-211ENST00000553128 ENPP3O14638 875 aa15.06■□□□□ 0
VPS29-211ENST00000553128 PPP1R11O60927 126 aaPredicted RBP15.06■□□□□ 0
VPS29-211ENST00000553128 ITGB1P05556 798 aa15.06■□□□□ 0
VPS29-211ENST00000553128 NRIP1P48552 1158 aa15.06■□□□□ 0
VPS29-211ENST00000553128 ADAM17P78536 824 aa15.06■□□□□ 0
VPS29-211ENST00000553128 COASYQ13057 564 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms