RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 SPATA31C1P0DKV0 1188 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 LMNB1P20700 586 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 KCNJ6P48051 423 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 USP14P54578 494 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 HMGCS2P54868 508 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 CTTNQ14247 550 aaKnown RBP10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 CNGA4Q8IV77 575 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 NELFCDQ8IXH7 590 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 MYOCDQ8IZQ8 938 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 GUF1Q8N442 669 aaKnown RBP10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 EIF2AK1Q9BQI3 630 aaKnown RBP10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 ZNF577Q9BSK1 485 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 DESI2Q9BSY9 194 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 BHMT2Q9H2M3 363 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 ZHX2Q9Y6X8 837 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 RBBP6Q7Z6E9 1792 aaKnown RBP10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 PARP14Q460N5 1801 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 LGALS16A8MUM7 142 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 CCP110O43303 1012 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 ARP10275 920 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 SLC12A3P55017 1021 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 PSMD2Q13200 908 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 MTF1Q14872 753 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 MUM1L1Q5H9M0 696 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 CENPPQ6IPU0 288 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 TOGARAM2Q6ZUX3 1019 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 TPH2Q8IWU9 490 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 GPC2Q8N158 579 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 PCMTD1Q96MG8 357 aaPredicted RBP10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 NOC4LQ9BVI4 516 aaKnown RBP10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 FGFBP2Q9BYJ0 223 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 AS3MTQ9HBK9 375 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 SLC38A10Q9HBR0 1119 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 POLD4Q9HCU8 107 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 COL20A1Q9P218 1284 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 PPP1R9AQ9ULJ8 1098 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 ITIH6Q6UXX5 1313 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 MYH11P35749 1972 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 PTPRAP18433 802 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 BACE1P56817 501 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 EHHADHQ08426 723 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 COBLL1Q53SF7 1204 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 NSMFQ6X4W1 530 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 MB21D1Q8N884 522 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 ZNF280CQ8ND82 737 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 PIGOQ8TEQ8 1089 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 TSC1Q92574 1164 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 ATG4CQ96DT6 458 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 WNK4Q96J92 1243 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 PANX2Q96RD6 677 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 TSG101Q99816 390 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 FHDC1Q9C0D6 1143 aaPredicted RBP10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 SPON1Q9HCB6 807 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 GINM1Q9NU53 330 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 PPP2R2CQ9Y2T4 447 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 RABGAP1Q9Y3P9 1069 aa10.1□□□□□ -0.79
RAB3IP-218ENST00000553099 NKRFO15226 690 aaKnown RBP eCLIP10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 ZSCAN12O43309 604 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 DDNO94850 711 aaPredicted RBP10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 EIF2AK2P19525 551 aaKnown RBP10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 HSD17B4P51659 736 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 HIRAP54198 1017 aaPredicted RBP10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 SETQ01105 290 aaPredicted RBP10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 ARSHQ5FYA8 562 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 SYT10Q6XYQ8 523 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 OTOP1Q7RTM1 612 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 MCF2L2Q86YR7 1114 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 IL31RAQ8NI17 732 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 DYDC2Q96IM9 177 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 REEP2Q9BRK0 252 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 KCND1Q9NSA2 647 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 PHIPQ8WWQ0 1821 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 IPO5O00410 1097 aaKnown RBP10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 ZBED4O75132 1171 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 PSMD10O75832 226 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 TRIM21P19474 475 aaKnown RBP10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 KRT9P35527 623 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 DNM2P50570 870 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 LRRC63Q05C16 580 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 TBC1D8BQ0IIM8 1120 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 TRIM14Q14142 442 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 DLK2Q6UY11 383 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 KIF18AQ8NI77 898 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 CLEC4DQ8WXI8 215 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 ABHD10Q9NUJ1 306 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 PAXBP1Q9Y5B6 917 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 STK24Q9Y6E0 443 aa10.09□□□□□ -0.79
RAB3IP-218ENST00000553099 RNF225M0QZC1 329 aaPredicted RBP10.08□□□□□ -0.8
RAB3IP-218ENST00000553099 KIF2AO00139 706 aaPredicted RBP10.08□□□□□ -0.8
RAB3IP-218ENST00000553099 TRAF5O00463 557 aa10.08□□□□□ -0.8
RAB3IP-218ENST00000553099 SLC26A4O43511 780 aa10.08□□□□□ -0.8
RAB3IP-218ENST00000553099 RPS6P62753 249 aaKnown RBP10.08□□□□□ -0.8
RAB3IP-218ENST00000553099 TEX2Q8IWB9 1127 aa10.08□□□□□ -0.8
RAB3IP-218ENST00000553099 SYT2Q8N9I0 419 aaPredicted RBP10.08□□□□□ -0.8
RAB3IP-218ENST00000553099 SLC5A5Q92911 643 aa10.08□□□□□ -0.8
RAB3IP-218ENST00000553099 TRERF1Q96PN7 1200 aa10.08□□□□□ -0.8
RAB3IP-218ENST00000553099 TEKT3Q9BXF9 490 aa10.08□□□□□ -0.8
RAB3IP-218ENST00000553099 WDR11Q9BZH6 1224 aa10.08□□□□□ -0.8
RAB3IP-218ENST00000553099 PITPNM2Q9BZ72 1349 aa10.08□□□□□ -0.8
RAB3IP-218ENST00000553099 RSPH10B2B2RC85 870 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms