RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 FXR1P51114 621 aaKnown RBP eCLIP11.31□□□□□ -0.6
CNOT2-243ENST00000553078 PMS1P54277 932 aaKnown RBP11.31□□□□□ -0.6
CNOT2-243ENST00000553078 ZNF280AP59817 542 aaPredicted RBP11.31□□□□□ -0.6
CNOT2-243ENST00000553078 SPA17Q15506 151 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 KIF4BQ2VIQ3 1234 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 EDRF1Q3B7T1 1238 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 MIGA2Q7L4E1 593 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 CACNA2D4Q7Z3S7 1137 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 LDHDQ86WU2 507 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 REXO1L1PQ8IX06 675 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 CCDC170Q8IYT3 715 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 SYT2Q8N9I0 419 aaPredicted RBP11.31□□□□□ -0.6
CNOT2-243ENST00000553078 PRPF38AQ8NAV1 312 aaKnown RBP11.31□□□□□ -0.6
CNOT2-243ENST00000553078 UBXN4Q92575 508 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 ERGIC2Q96RQ1 377 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 ZNF577Q9BSK1 485 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 KIAA1683Q9H0B3 1180 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 HAUS4Q9H6D7 363 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 KCND2Q9NZV8 630 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 CD2APQ9Y5K6 639 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 ADGRG1Q9Y653 693 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 GJA3Q9Y6H8 435 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 UBE4BO95155 1302 aa11.31□□□□□ -0.6
CNOT2-243ENST00000553078 CTAGE9A4FU28 777 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 MSH4O15457 936 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 KRT86O43790 486 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 USO1O60763 962 aaKnown RBP11.3□□□□□ -0.6
CNOT2-243ENST00000553078 MED24O75448 989 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 POTEIP0CG38 1075 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 CYP11B2P19099 503 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 POTEGQ6S5H5 508 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 POTEEQ6S8J3 1075 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 MICALL2Q8IY33 904 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 CEP112Q8N8E3 955 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 ZBED3Q96IU2 234 aaPredicted RBP11.3□□□□□ -0.6
CNOT2-243ENST00000553078 EIF2AK1Q9BQI3 630 aaKnown RBP11.3□□□□□ -0.6
CNOT2-243ENST00000553078 DESI2Q9BSY9 194 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 EDEM3Q9BZQ6 932 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 NDST4Q9H3R1 872 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 L2HGDHQ9H9P8 463 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 LZTFL1Q9NQ48 299 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 SEL1LQ9UBV2 794 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 PPP2R3BQ9Y5P8 575 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 MYH7BA7E2Y1 1941 aa11.3□□□□□ -0.6
CNOT2-243ENST00000553078 TTC26A0AVF1 554 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 ARHGEF35A5YM69 484 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 POTEB2H3BUK9 544 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 EPB41P11171 864 aaKnown RBP11.29□□□□□ -0.6
CNOT2-243ENST00000553078 STAT3P40763 770 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 SLC12A3P55017 1021 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 MAP3K10Q02779 954 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 PABPC4Q13310 644 aaKnown RBP eCLIP11.29□□□□□ -0.6
CNOT2-243ENST00000553078 PPP2R5CQ13362 524 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 RRP1BQ14684 758 aaKnown RBP11.29□□□□□ -0.6
CNOT2-243ENST00000553078 NBPF9Q3BBW0 867 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 CEP55Q53EZ4 464 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 RAD9BQ6WBX8 426 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 NIPA1Q7RTP0 329 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 KCNK18Q7Z418 384 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 IRF2BP1Q8IU81 584 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 FMNL3Q8IVF7 1028 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 NELFCDQ8IXH7 590 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 LRRC15Q8TF66 581 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 CRYGNQ8WXF5 182 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 GOLGA1Q92805 767 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 DNAJC19Q96DA6 116 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 NACC1Q96RE7 527 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 DNAJC7Q99615 494 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 NAPGQ99747 312 aaPredicted RBP11.29□□□□□ -0.6
CNOT2-243ENST00000553078 NUDT12Q9BQG2 462 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 SEMA6BQ9H3T3 888 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 MMRN2Q9H8L6 949 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 METTL14Q9HCE5 456 aaKnown RBP11.29□□□□□ -0.6
CNOT2-243ENST00000553078 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
CNOT2-243ENST00000553078 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.29□□□□□ -0.6
CNOT2-243ENST00000553078 COL4A5P29400 1685 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 EFCAB8A8MWE9 144 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 FAM86B1E9PN63 330 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 EIF3DO15371 548 aaKnown RBP eCLIP11.28□□□□□ -0.6
CNOT2-243ENST00000553078 SLC16A3O15427 465 aaKnown RBP11.28□□□□□ -0.6
CNOT2-243ENST00000553078 CHMP2AO43633 222 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 EDIL3O43854 480 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 FLOT1O75955 427 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 NDUFA10O95299 355 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 GCNT3O95395 438 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 FAM86B2P0C5J1 330 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 BCRP11274 1271 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 GMPSP49915 693 aaPredicted RBP11.28□□□□□ -0.6
CNOT2-243ENST00000553078 CYP4A11Q02928 519 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 EHHADHQ08426 723 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 NCBP1Q09161 790 aaKnown RBP11.28□□□□□ -0.6
CNOT2-243ENST00000553078 ALCAMQ13740 583 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 EPHA7Q15375 998 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 ZNF569Q5MCW4 686 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 IQCEQ6IPM2 695 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 CATSPER3Q86XQ3 398 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 SCYL3Q8IZE3 742 aa11.28□□□□□ -0.6
CNOT2-243ENST00000553078 GOLGA5Q8TBA6 731 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms