RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 MMP3P08254 477 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 ITGB5P18084 799 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 SFNP31947 248 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 PURAQ00577 322 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 ARHGAP1Q07960 439 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 Q4G0T1 1027 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 FAM160B1Q5W0V3 765 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 KRT40Q6A162 431 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 ZNF746Q6NUN9 644 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 DIS3L2Q8IYB7 885 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 AFG1LQ8WV93 481 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 CRYGNQ8WXF5 182 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 ZNF577Q9BSK1 485 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 SMARCAD1Q9H4L7 1026 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 SLC9A2Q9UBY0 812 aa11.64□□□□□ -0.55
TRAFD1-208ENST00000552890 LRRC37A2A6NM11 1700 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 LCTP09848 1927 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 M0R2N6 131 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 RGS20O76081 388 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 LARGE1O95461 756 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 BMP15O95972 392 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 MYL3P08590 195 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 FDPSP14324 419 aaKnown RBP11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 JAK3P52333 1124 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 CUL4AQ13619 759 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 ITGA7Q13683 1181 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 PRR16Q569H4 304 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 MIS18BP1Q6P0N0 1132 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 CYFIP1Q7L576 1253 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 SESTD1Q86VW0 696 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 EXOC8Q8IYI6 725 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 C7orf31Q8N865 590 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 IL31RAQ8NI17 732 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 LBHD1Q9BQE6 289 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 RAB34Q9BZG1 259 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 ERAP1Q9NZ08 941 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 NOD1Q9Y239 953 aa11.63□□□□□ -0.55
TRAFD1-208ENST00000552890 WDR64B1ANS9 1081 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 LAD1O00515 517 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 JAK2O60674 1132 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 GAS7O60861 476 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 KCNA2P16389 499 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 RTP1P59025 263 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 LARP1BQ659C4 914 aaKnown RBP11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 CXCL17Q6UXB2 119 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 PIK3AP1Q6ZUJ8 805 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 PLPPR4Q7Z2D5 763 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 NOSTRINQ8IVI9 506 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 SLC43A3Q8NBI5 491 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 FAM167AQ96KS9 214 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 AGO4Q9HCK5 861 aaKnown RBP11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 TMEM260Q9NX78 707 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 DDX25Q9UHL0 483 aaKnown RBP11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 KCNJ14Q9UNX9 436 aa11.62□□□□□ -0.55
TRAFD1-208ENST00000552890 FRMPD3Q5JV73 1810 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 RRN3P2A6NIE6 340 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 H3BRB1 525 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 CTAGE5O15320 804 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 CCNT1O60563 726 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 PPFIA3O75145 1194 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 ARIH2O95376 493 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 F2P00734 622 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 PSAPP07602 524 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 CLTBP09497 229 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 U2AF2P26368 475 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 GJB2P29033 226 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 MNX1P50219 401 aaPredicted RBP11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 BEX3Q00994 111 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 BFSP2Q13515 415 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 LETM2Q2VYF4 491 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 RILPL1Q5EBL4 403 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 PRPF38BQ5VTL8 546 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 BRAPQ7Z569 592 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 GLG1Q92896 1179 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 FERMT2Q96AC1 680 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 MBOAT7Q96N66 472 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 TEKT3Q9BXF9 490 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 TUT1Q9H6E5 874 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 ATP11BQ9Y2G3 1177 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 PCDHA10Q9Y5I2 948 aa11.61□□□□□ -0.55
TRAFD1-208ENST00000552890 EMSYQ7Z589 1322 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 IGLV3-22A0A075B6J6 115 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 BTBD18B2RXH4 712 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 FAM86B1E9PN63 330 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 CAND2O75155 1236 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 FAM86B2P0C5J1 330 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 CDK7P50613 346 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 SP2Q02086 613 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 INF2Q27J81 1249 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 TMEM266Q2M3C6 531 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 HSDL1Q3SXM5 330 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 LRCH2Q5VUJ6 765 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 RSPH3Q86UC2 560 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 CAGE1Q8TC20 777 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 DIS3LQ8TF46 1054 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 ATP6V0A1Q93050 837 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 AIFM3Q96NN9 605 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 GPR20Q99678 358 aa11.6□□□□□ -0.55
TRAFD1-208ENST00000552890 TMEM39AQ9NV64 488 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms