RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 TUBGCP2Q9BSJ2 902 aa7.59□□□□□ -1.19
CCDC59-206ENST00000552412 POLR3CQ9BUI4 534 aaPredicted RBP7.59□□□□□ -1.19
CCDC59-206ENST00000552412 EDEM3Q9BZQ6 932 aa7.59□□□□□ -1.19
CCDC59-206ENST00000552412 VCPKMTQ9H867 229 aa7.59□□□□□ -1.19
CCDC59-206ENST00000552412 ZNHIT6Q9NWK9 470 aaKnown RBP7.59□□□□□ -1.19
CCDC59-206ENST00000552412 TAB2Q9NYJ8 693 aa7.59□□□□□ -1.19
CCDC59-206ENST00000552412 PIM2Q9P1W9 311 aa7.59□□□□□ -1.19
CCDC59-206ENST00000552412 FEM1BQ9UK73 627 aa7.59□□□□□ -1.19
CCDC59-206ENST00000552412 PRR12Q9ULL5 1215 aa7.59□□□□□ -1.19
CCDC59-206ENST00000552412 CAPN11Q9UMQ6 739 aa7.59□□□□□ -1.19
CCDC59-206ENST00000552412 LUC7L2Q9Y383 392 aaKnown RBP7.59□□□□□ -1.19
CCDC59-206ENST00000552412 MRPL11Q9Y3B7 192 aaKnown RBP7.59□□□□□ -1.19
CCDC59-206ENST00000552412 PCDHAC2Q9Y5I4 1007 aa7.59□□□□□ -1.19
CCDC59-206ENST00000552412 ADGRG1Q9Y653 693 aa7.59□□□□□ -1.19
CCDC59-206ENST00000552412 ATAD5Q96QE3 1844 aa7.59□□□□□ -1.19
CCDC59-206ENST00000552412 RBBP6Q7Z6E9 1792 aaKnown RBP7.59□□□□□ -1.2
CCDC59-206ENST00000552412 COL4A5P29400 1685 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 TRIM49BA6NDI0 452 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 FAM196BA6NMK8 535 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 USP17L15C9J2P7 530 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 USP17L13C9JLJ4 530 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 USP17L11C9JVI0 530 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 USP17L18D6R9N7 530 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 USP17L22D6RA61 530 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 USP17L17D6RBQ6 530 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 USP17L19D6RCP7 530 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 USP17L20D6RJB6 530 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 KIF5CO60282 957 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 PLA2G4BP0C869 781 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 FDX1P10109 184 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 DPEP1P16444 411 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 CASQ1P31415 396 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 KRT9P35527 623 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 CAP2P40123 477 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 MTIF2P46199 727 aaKnown RBP7.58□□□□□ -1.2
CCDC59-206ENST00000552412 FXR1P51114 621 aaKnown RBP eCLIP7.58□□□□□ -1.2
CCDC59-206ENST00000552412 PMS1P54277 932 aaKnown RBP7.58□□□□□ -1.2
CCDC59-206ENST00000552412 MARSP56192 900 aaKnown RBP7.58□□□□□ -1.2
CCDC59-206ENST00000552412 ZNF280AP59817 542 aaPredicted RBP7.58□□□□□ -1.2
CCDC59-206ENST00000552412 ZBED6P86452 979 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 FKBP3Q00688 224 aaKnown RBP7.58□□□□□ -1.2
CCDC59-206ENST00000552412 GHRHRQ02643 423 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 PPP2R3AQ06190 1150 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 SPIRE1Q08AE8 756 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 NCBP1Q09161 790 aaKnown RBP7.58□□□□□ -1.2
CCDC59-206ENST00000552412 USP17L24Q0WX57 530 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 COASYQ13057 564 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 MAN2A1Q16706 1144 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 FAM26FQ5R3K3 315 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 ANKRD40Q6AI12 368 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 CIAPIN1Q6FI81 312 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 USP17L6PQ6QN14 398 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 CCDC125Q86Z20 511 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 ZC3H3Q8IXZ2 948 aaKnown RBP7.58□□□□□ -1.2
CCDC59-206ENST00000552412 CCDC170Q8IYT3 715 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 MYOCDQ8IZQ8 938 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 EHBP1Q8NDI1 1231 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 ZNF397Q8NF99 534 aaPredicted RBP7.58□□□□□ -1.2
CCDC59-206ENST00000552412 OR8K1Q8NGG5 319 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 LPAR1Q92633 364 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 LENG9Q96B70 501 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 DNAJC19Q96DA6 116 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 PLIN2Q99541 437 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 TTYH3Q9C0H2 523 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 MAF1Q9H063 256 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 VPS16Q9H269 839 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 TUFT1Q9NNX1 390 aa7.58□□□□□ -1.2
CCDC59-206ENST00000552412 MAP3K20Q9NYL2 800 aaKnown RBP7.58□□□□□ -1.2
CCDC59-206ENST00000552412 A0A1W2PRG0 241 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 TCP10L2B9ZVM9 353 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 GCOM1H8Y6P7 765 aaPredicted RBP7.57□□□□□ -1.2
CCDC59-206ENST00000552412 DPYSL4O14531 572 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 RAD21O60216 631 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 RAD17O75943 681 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 POLR2MP0CAP2 368 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 FCER1AP12319 257 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 HNRNPH3P31942 346 aaKnown RBP7.57□□□□□ -1.2
CCDC59-206ENST00000552412 CYLC1P35663 651 aaPredicted RBP7.57□□□□□ -1.2
CCDC59-206ENST00000552412 SLC12A3P55017 1021 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 TBC1D8BQ0IIM8 1120 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 PPP2R5CQ13362 524 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 KIF4BQ2VIQ3 1234 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 EDRF1Q3B7T1 1238 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 ZCWPW2Q504Y3 356 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 DALRD3Q5D0E6 543 aaKnown RBP7.57□□□□□ -1.2
CCDC59-206ENST00000552412 LRRC55Q6ZSA7 311 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 TOGARAM2Q6ZUX3 1019 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 NIPA1Q7RTP0 329 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 KRT26Q7Z3Y9 468 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 TXLNBQ8N3L3 684 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 SYT2Q8N9I0 419 aaPredicted RBP7.57□□□□□ -1.2
CCDC59-206ENST00000552412 NEK9Q8TD19 979 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 JDP2Q8WYK2 163 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 ZDHHC16Q969W1 377 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 HOOK2Q96ED9 719 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 FEZ1Q99689 392 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 NOC4LQ9BVI4 516 aaKnown RBP7.57□□□□□ -1.2
CCDC59-206ENST00000552412 NUCKS1Q9H1E3 243 aaKnown RBP7.57□□□□□ -1.2
CCDC59-206ENST00000552412 TAOK3Q9H2K8 898 aa7.57□□□□□ -1.2
CCDC59-206ENST00000552412 SEMA6BQ9H3T3 888 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms