RNA–Protein interactions for RNA: ENST00000552187.1

TMEM106C-218, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-218ENST00000552187 NSMFQ6X4W1 530 aa9.49□□□□□ -0.89
TMEM106C-218ENST00000552187 LRRC47Q8N1G4 583 aaKnown RBP9.49□□□□□ -0.89
TMEM106C-218ENST00000552187 C7orf31Q8N865 590 aa9.49□□□□□ -0.89
TMEM106C-218ENST00000552187 SUMF1Q8NBK3 374 aa9.49□□□□□ -0.89
TMEM106C-218ENST00000552187 ATP8B4Q8TF62 1192 aa9.49□□□□□ -0.89
TMEM106C-218ENST00000552187 POF1BQ8WVV4 589 aa9.49□□□□□ -0.89
TMEM106C-218ENST00000552187 KAT2BQ92831 832 aa9.49□□□□□ -0.89
TMEM106C-218ENST00000552187 CLP1Q92989 425 aaKnown RBP9.49□□□□□ -0.89
TMEM106C-218ENST00000552187 TRERF1Q96PN7 1200 aa9.49□□□□□ -0.89
TMEM106C-218ENST00000552187 NEK1Q96PY6 1258 aa9.49□□□□□ -0.89
TMEM106C-218ENST00000552187 PLVAPQ9BX97 442 aa9.49□□□□□ -0.89
TMEM106C-218ENST00000552187 FEM1BQ9UK73 627 aa9.49□□□□□ -0.89
TMEM106C-218ENST00000552187 NR2E1Q9Y466 385 aa9.49□□□□□ -0.89
TMEM106C-218ENST00000552187 CYP2D7A0A087X1C5 515 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 PRR5-ARHGAP8B1AHC4 643 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 THPOP40225 353 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 ALDH5A1P51649 535 aaPredicted RBP9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 ARHGAP8P85298 464 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 BTG3Q14201 252 aaPredicted RBP9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 TKFCQ3LXA3 575 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 MUM1L1Q5H9M0 696 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 C20orf194Q5TEA3 1177 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 SPPL3Q8TCT6 385 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 AFG1LQ8WV93 481 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 ALG1Q9BT22 464 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 S1PR5Q9H228 398 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 CDH22Q9UJ99 828 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 ANGPTL2Q9UKU9 493 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 ISY1Q9ULR0 285 aaKnown RBP9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 HDAC5Q9UQL6 1122 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 CACNA1IQ9P0X4 2223 aa9.48□□□□□ -0.89
TMEM106C-218ENST00000552187 MMP3P08254 477 aa9.47□□□□□ -0.89
TMEM106C-218ENST00000552187 TXNP10599 105 aaKnown RBP9.47□□□□□ -0.89
TMEM106C-218ENST00000552187 TECP42680 631 aa9.47□□□□□ -0.89
TMEM106C-218ENST00000552187 TNNI3KQ59H18 835 aa9.47□□□□□ -0.89
TMEM106C-218ENST00000552187 ZNF710Q8N1W2 664 aa9.47□□□□□ -0.89
TMEM106C-218ENST00000552187 SCFD2Q8WU76 684 aa9.47□□□□□ -0.89
TMEM106C-218ENST00000552187 ZNF512BQ96KM6 892 aaPredicted RBP9.47□□□□□ -0.89
TMEM106C-218ENST00000552187 OSBPL7Q9BZF2 842 aa9.47□□□□□ -0.89
TMEM106C-218ENST00000552187 ANTXR1Q9H6X2 564 aa9.47□□□□□ -0.89
TMEM106C-218ENST00000552187 ERVK-5Q9HDB9 667 aa9.47□□□□□ -0.89
TMEM106C-218ENST00000552187 GPR108Q9NPR9 543 aa9.47□□□□□ -0.89
TMEM106C-218ENST00000552187 FPGT-TNNI3KV9GXZ4 949 aa9.47□□□□□ -0.89
TMEM106C-218ENST00000552187 BPTFQ12830 3046 aa9.47□□□□□ -0.89
TMEM106C-218ENST00000552187 LCTP09848 1927 aa9.46□□□□□ -0.89
TMEM106C-218ENST00000552187 KINO60870 393 aaKnown RBP9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 ARIH2O95376 493 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 SP9P0CG40 484 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 PSEN2P49810 448 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 SNAP25P60880 206 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 G3BP1Q13283 466 aaKnown RBP eCLIP9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 VARS2Q5ST30 1063 aaKnown RBP9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 ANKRD54Q6NXT1 300 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 SYCE2Q6PIF2 218 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 C16orf86Q6ZW13 317 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 SIX5Q8N196 739 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 LCORLQ8N3X6 602 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 GPR161Q8N6U8 529 aaKnown RBP9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 KLHL23Q8NBE8 558 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 MICAL1Q8TDZ2 1067 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 P2RX5Q93086 422 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 MEIS3Q99687 375 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 POMKQ9H5K3 350 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 RC3H2Q9HBD1 1191 aaKnown RBP9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 ADD3Q9UEY8 706 aaKnown RBP9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 LIMD1Q9UGP4 676 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 FBXL21Q9UKT6 434 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 USP18Q9UMW8 372 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 MRPL42Q9Y6G3 142 aaKnown RBP9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 FANCMQ8IYD8 2048 aa9.46□□□□□ -0.9
TMEM106C-218ENST00000552187 PRKAB2O43741 272 aa9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 CTSHP09668 335 aa9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 SRGAP2BP0DMP2 458 aa9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 CASTP20810 708 aaKnown RBP9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 RARSP54136 660 aaKnown RBP9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 PDE4DQ08499 809 aa9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 IKQ13123 557 aaPredicted RBP9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 BAATQ14032 418 aaPredicted RBP9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 DUSP6Q16828 381 aa9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 CHST3Q7LGC8 479 aa9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 DHX37Q8IY37 1157 aaKnown RBP9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 TDRD5Q8NAT2 981 aaKnown RBP9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 SSH1Q8WYL5 1049 aa9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 NYAP2Q9P242 653 aa9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 CLIP2Q9UDT6 1046 aa9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 PCDHGA4Q9Y5G9 962 aa9.45□□□□□ -0.9
TMEM106C-218ENST00000552187 DSPP15924 2871 aaKnown RBP9.44□□□□□ -0.9
TMEM106C-218ENST00000552187 TMEM232C9JQI7 657 aa9.44□□□□□ -0.9
TMEM106C-218ENST00000552187 DPYSL4O14531 572 aa9.44□□□□□ -0.9
TMEM106C-218ENST00000552187 PPFIA3O75145 1194 aa9.44□□□□□ -0.9
TMEM106C-218ENST00000552187 PROS1P07225 676 aa9.44□□□□□ -0.9
TMEM106C-218ENST00000552187 ZNF286BP0CG31 522 aa9.44□□□□□ -0.9
TMEM106C-218ENST00000552187 FDX1P10109 184 aa9.44□□□□□ -0.9
TMEM106C-218ENST00000552187 RFX1P22670 979 aa9.44□□□□□ -0.9
TMEM106C-218ENST00000552187 HIC1Q14526 733 aa9.44□□□□□ -0.9
TMEM106C-218ENST00000552187 KIAA0753Q2KHM9 967 aa9.44□□□□□ -0.9
TMEM106C-218ENST00000552187 NAALADL2Q58DX5 795 aa9.44□□□□□ -0.9
TMEM106C-218ENST00000552187 SPECC1Q5M775 1068 aa9.44□□□□□ -0.9
TMEM106C-218ENST00000552187 C12orf60Q5U649 245 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms