RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 SH3RF1Q7Z6J0 888 aa19.76■□□□□ 0.75
CDK4-208ENST00000551706 DHX37Q8IY37 1157 aaKnown RBP19.76■□□□□ 0.75
CDK4-208ENST00000551706 GIMAP8Q8ND71 665 aaPredicted RBP19.76■□□□□ 0.75
CDK4-208ENST00000551706 TRIM43Q96BQ3 446 aaPredicted RBP19.76■□□□□ 0.75
CDK4-208ENST00000551706 ZFP91Q96JP5 570 aaPredicted RBP19.76■□□□□ 0.75
CDK4-208ENST00000551706 PGBD1Q96JS3 809 aa19.76■□□□□ 0.75
CDK4-208ENST00000551706 SENP7Q9BQF6 1050 aa19.76■□□□□ 0.75
CDK4-208ENST00000551706 JADE2Q9NQC1 790 aa19.76■□□□□ 0.75
CDK4-208ENST00000551706 UBIAD1Q9Y5Z9 338 aa19.76■□□□□ 0.75
CDK4-208ENST00000551706 BDP1A6H8Y1 2624 aa19.76■□□□□ 0.75
CDK4-208ENST00000551706 FDPSP14324 419 aaKnown RBP19.75■□□□□ 0.75
CDK4-208ENST00000551706 ITGB5P18084 799 aa19.75■□□□□ 0.75
CDK4-208ENST00000551706 UBA1P22314 1058 aaKnown RBP19.75■□□□□ 0.75
CDK4-208ENST00000551706 HOXD11P31277 338 aaPredicted RBP19.75■□□□□ 0.75
CDK4-208ENST00000551706 HMGN5P82970 282 aaKnown RBP19.75■□□□□ 0.75
CDK4-208ENST00000551706 ST3GAL1Q11201 340 aa19.75■□□□□ 0.75
CDK4-208ENST00000551706 MTMR1Q13613 665 aa19.75■□□□□ 0.75
CDK4-208ENST00000551706 CEP55Q53EZ4 464 aa19.75■□□□□ 0.75
CDK4-208ENST00000551706 MYSM1Q5VVJ2 828 aa19.75■□□□□ 0.75
CDK4-208ENST00000551706 BLIDQ8IZY5 108 aa19.75■□□□□ 0.75
CDK4-208ENST00000551706 ADAMTS19Q8TE59 1207 aa19.75■□□□□ 0.75
CDK4-208ENST00000551706 AFG1LQ8WV93 481 aa19.75■□□□□ 0.75
CDK4-208ENST00000551706 VTI1AQ96AJ9 217 aa19.75■□□□□ 0.75
CDK4-208ENST00000551706 MXRA8Q9BRK3 442 aa19.75■□□□□ 0.75
CDK4-208ENST00000551706 PHF20Q9BVI0 1012 aa19.75■□□□□ 0.75
CDK4-208ENST00000551706 SEZ6LQ9BYH1 1024 aa19.75■□□□□ 0.75
CDK4-208ENST00000551706 JAK2O60674 1132 aa19.74■□□□□ 0.75
CDK4-208ENST00000551706 GGPS1O95749 300 aa19.74■□□□□ 0.75
CDK4-208ENST00000551706 CYP3A4P08684 503 aa19.74■□□□□ 0.75
CDK4-208ENST00000551706 DNAJB2P25686 324 aa19.74■□□□□ 0.75
CDK4-208ENST00000551706 ZNF76P36508 570 aa19.74■□□□□ 0.75
CDK4-208ENST00000551706 CXCL17Q6UXB2 119 aa19.74■□□□□ 0.75
CDK4-208ENST00000551706 PPTC7Q8NI37 304 aa19.74■□□□□ 0.75
CDK4-208ENST00000551706 RASGRP4Q8TDF6 673 aa19.74■□□□□ 0.75
CDK4-208ENST00000551706 CRYGNQ8WXF5 182 aa19.74■□□□□ 0.75
CDK4-208ENST00000551706 ASB2Q96Q27 587 aa19.74■□□□□ 0.75
CDK4-208ENST00000551706 MLXIPQ9HAP2 919 aa19.74■□□□□ 0.75
CDK4-208ENST00000551706 KIAA1217Q5T5P2 1943 aa19.74■□□□□ 0.75
CDK4-208ENST00000551706 NCOR1O75376 2440 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 A0A0U1RQG5 324 aaPredicted RBP19.73■□□□□ 0.75
CDK4-208ENST00000551706 MMP3P08254 477 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 MYL3P08590 195 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 PURAQ00577 322 aaKnown RBP19.73■□□□□ 0.75
CDK4-208ENST00000551706 SP2Q02086 613 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 SEMA3FQ13275 785 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 TRIM29Q14134 588 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 DGKDQ16760 1214 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 METTL7BQ6UX53 244 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 NIPA1Q7RTP0 329 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 PPM1EQ8WY54 764 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 SPATA33Q96N06 139 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 MTG1Q9BT17 334 aaPredicted RBP19.73■□□□□ 0.75
CDK4-208ENST00000551706 ZNF576Q9H609 170 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 BRMS1Q9HCU9 246 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 THEGQ9P2T0 379 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 KCNJ14Q9UNX9 436 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 MROH7Q68CQ1 1323 aa19.73■□□□□ 0.75
CDK4-208ENST00000551706 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.72■□□□□ 0.75
CDK4-208ENST00000551706 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.72■□□□□ 0.75
CDK4-208ENST00000551706 M0R2N6 131 aa19.72■□□□□ 0.75
CDK4-208ENST00000551706 ADAMTS3O15072 1205 aa19.72■□□□□ 0.75
CDK4-208ENST00000551706 USP11P51784 963 aa19.72■□□□□ 0.75
CDK4-208ENST00000551706 EPHB4P54760 987 aa19.72■□□□□ 0.75
CDK4-208ENST00000551706 NPY5RQ15761 445 aa19.72■□□□□ 0.75
CDK4-208ENST00000551706 KRT25Q7Z3Z0 450 aa19.72■□□□□ 0.75
CDK4-208ENST00000551706 TMX3Q96JJ7 454 aa19.72■□□□□ 0.75
CDK4-208ENST00000551706 UHRF1Q96T88 793 aaPredicted RBP19.72■□□□□ 0.75
CDK4-208ENST00000551706 MEIS1O00470 390 aa19.71■□□□□ 0.75
CDK4-208ENST00000551706 NOP56O00567 594 aaKnown RBP19.71■□□□□ 0.75
CDK4-208ENST00000551706 PPFIA4O75335 1185 aa19.71■□□□□ 0.75
CDK4-208ENST00000551706 ITGB8P26012 769 aa19.71■□□□□ 0.75
CDK4-208ENST00000551706 SETQ01105 290 aaPredicted RBP19.71■□□□□ 0.75
CDK4-208ENST00000551706 TLE2Q04725 743 aa19.71■□□□□ 0.75
CDK4-208ENST00000551706 GAS2L1Q99501 681 aaPredicted RBP19.71■□□□□ 0.75
CDK4-208ENST00000551706 KCNH7Q9NS40 1196 aa19.71■□□□□ 0.75
CDK4-208ENST00000551706 KIF3AQ9Y496 699 aa19.71■□□□□ 0.75
CDK4-208ENST00000551706 ARVCFO00192 962 aa19.7■□□□□ 0.74
CDK4-208ENST00000551706 DTNBO60941 627 aa19.7■□□□□ 0.74
CDK4-208ENST00000551706 CD2BP2O95400 341 aaKnown RBP19.7■□□□□ 0.74
CDK4-208ENST00000551706 HOXD8P13378 290 aaPredicted RBP19.7■□□□□ 0.74
CDK4-208ENST00000551706 KCNA2P16389 499 aa19.7■□□□□ 0.74
CDK4-208ENST00000551706 CIITAP33076 1130 aa19.7■□□□□ 0.74
CDK4-208ENST00000551706 MRPS5P82675 430 aaKnown RBP19.7■□□□□ 0.74
CDK4-208ENST00000551706 ITGA7Q13683 1181 aa19.7■□□□□ 0.74
CDK4-208ENST00000551706 CYFIP1Q7L576 1253 aa19.7■□□□□ 0.74
CDK4-208ENST00000551706 ANKRD33Q7Z3H0 272 aa19.7■□□□□ 0.74
CDK4-208ENST00000551706 FAM184AQ8NB25 1140 aa19.7■□□□□ 0.74
CDK4-208ENST00000551706 TIFAQ96CG3 184 aa19.7■□□□□ 0.74
CDK4-208ENST00000551706 TOX2Q96NM4 488 aa19.7■□□□□ 0.74
CDK4-208ENST00000551706 CCDC194A0A1B0GVG4 234 aa19.69■□□□□ 0.74
CDK4-208ENST00000551706 FAM86B1E9PN63 330 aa19.69■□□□□ 0.74
CDK4-208ENST00000551706 CLTBP09497 229 aa19.69■□□□□ 0.74
CDK4-208ENST00000551706 FAM86B2P0C5J1 330 aa19.69■□□□□ 0.74
CDK4-208ENST00000551706 KRT2P35908 639 aa19.69■□□□□ 0.74
CDK4-208ENST00000551706 CDK7P50613 346 aa19.69■□□□□ 0.74
CDK4-208ENST00000551706 NONOQ15233 471 aaKnown RBP eCLIP19.69■□□□□ 0.74
CDK4-208ENST00000551706 HSDL1Q3SXM5 330 aa19.69■□□□□ 0.74
CDK4-208ENST00000551706 PLA2G4DQ86XP0 818 aa19.69■□□□□ 0.74
CDK4-208ENST00000551706 SLC43A3Q8NBI5 491 aa19.69■□□□□ 0.74
CDK4-208ENST00000551706 CYP2W1Q8TAV3 490 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms