RNA–Protein interactions for RNA: ENST00000551465.1

R3HDM2-213, Transcript of R3H domain containing 2, humanhuman

TSL 2

Gene R3HDM2, Length 609 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-213ENST00000551465 AQRO60306 1485 aaKnown RBP eCLIP6.59□□□□□ -1.367e-8■■■■□ 24.6
R3HDM2-213ENST00000551465 SNAPC4Q5SXM2 1469 aa6.59□□□□□ -1.36
R3HDM2-213ENST00000551465 MBD5Q9P267 1494 aa6.59□□□□□ -1.36
R3HDM2-213ENST00000551465 UHRF1BP1Q6BDS2 1440 aa6.59□□□□□ -1.36
R3HDM2-213ENST00000551465 POLR3AO14802 1390 aaPredicted RBP6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 ANKRD30BQ9BXX2 1392 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 WDR33Q9C0J8 1336 aaKnown RBP6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 TMEM265A0A087WTH1 108 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 FANCGO15287 622 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 TIMM44O43615 452 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 SHOX2O60902 331 aaPredicted RBP6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 TADA3O75528 432 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 CEACAM5P06731 702 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 PTGS1P23219 599 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 GNA15P30679 374 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 NLRP5P59047 1200 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 HDLBPQ00341 1268 aaKnown RBP6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 PRKCQQ04759 706 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 SNW1Q13573 536 aaKnown RBP6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 CCDC85BQ15834 202 aaPredicted RBP6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 USH1GQ495M9 461 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 ZBTB37Q5TC79 503 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 SFMBT2Q5VUG0 894 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 LRFN4Q6PJG9 635 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 CRELD2Q6UXH1 353 aaPredicted RBP6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 SYNE3Q6ZMZ3 975 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 TTLL7Q6ZT98 887 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 CBLL1Q75N03 491 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 SV2BQ7L1I2 683 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 PLA2G4DQ86XP0 818 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 CEP57Q86XR8 500 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 CCDC65Q8IXS2 484 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 CCAR2Q8N163 923 aaKnown RBP6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 GALNT15Q8N3T1 639 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 ATP11CQ8NB49 1132 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 ZNF507Q8TCN5 953 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 PARD3BQ8TEW8 1205 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 SPDL1Q96EA4 605 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 MISP3Q96FF7 219 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 ASIC4Q96FT7 647 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 PLPPR2Q96GM1 343 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 RBM41Q96IZ5 413 aaKnown RBP6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 HRASLS5Q96KN8 279 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 FRMD6Q96NE9 622 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 MPHOSPH8Q99549 860 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 FUCA2Q9BTY2 467 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 TSGA10Q9BZW7 698 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 RETREG1Q9H6L5 497 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 KLC4Q9NSK0 619 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 EXOC1Q9NV70 894 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 VPS18Q9P253 973 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 GTF2IRD1Q9UHL9 959 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 TMCO1Q9UM00 188 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 EXOC6BQ9Y2D4 811 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 TMED5Q9Y3A6 229 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 DAAM1Q9Y4D1 1078 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 PCDHB5Q9Y5E4 795 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 FAM135AQ9P2D6 1515 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 ZNF608Q9ULD9 1512 aaPredicted RBP6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 CCDC141Q6ZP82 1450 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 RALGAPBQ86X10 1494 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 FGD6Q6ZV73 1430 aa6.58□□□□□ -1.36
R3HDM2-213ENST00000551465 BCORL1Q5H9F3 1711 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 BICDL2A1A5D9 508 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 NPHP1O15259 732 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 ZSCAN12O43309 604 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 ZEB2O60315 1214 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 MSL3P1P0C860 447 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 TRIM21P19474 475 aaKnown RBP6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 RPL13P26373 211 aaKnown RBP6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 CNGA1P29973 690 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 NTF4P34130 210 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 RANBP1P43487 201 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 NEK2P51955 445 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 ETF1P62495 437 aaKnown RBP6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 RING1Q06587 406 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 FOXD4Q12950 439 aaPredicted RBP6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 FZD5Q13467 585 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 WDR43Q15061 677 aaKnown RBP eCLIP6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 LCA5Q86VQ0 697 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 SESTD1Q86VW0 696 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 LRRC8AQ8IWT6 810 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 DRC7Q8IY82 874 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 ELOA2Q8IYF1 753 aaPredicted RBP6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 MIGA1Q8NAN2 632 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 AFAP1L1Q8TED9 768 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 LEO1Q8WVC0 666 aaPredicted RBP6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 LMBR1Q8WVP7 490 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 CUL5Q93034 780 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 ZBTB10Q96DT7 871 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 DHTKD1Q96HY7 919 aaPredicted RBP6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 GORASP1Q9BQQ3 440 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 NAT10Q9H0A0 1025 aaKnown RBP6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 DKK3Q9UBP4 350 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 HOOK1Q9UJC3 728 aaKnown RBP6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 PAIP2BQ9ULR5 123 aaKnown RBP6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 TPX2Q9ULW0 747 aaKnown RBP6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 ZNF148Q9UQR1 794 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 AK5Q9Y6K8 562 aa6.57□□□□□ -1.36
R3HDM2-213ENST00000551465 EHBP1L1Q8N3D4 1523 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms