RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 H0Y858 1186 aa11.97□□□□□ -0.49
BEST3-210ENST00000551160 CCER2I3L3R5 266 aa11.97□□□□□ -0.49
BEST3-210ENST00000551160 EIF3JO75822 258 aaKnown RBP11.97□□□□□ -0.49
BEST3-210ENST00000551160 RGS20O76081 388 aa11.97□□□□□ -0.49
BEST3-210ENST00000551160 RB1P06400 928 aa11.97□□□□□ -0.49
BEST3-210ENST00000551160 FGRP09769 529 aa11.97□□□□□ -0.49
BEST3-210ENST00000551160 SMIM10L2AP0DMW4 78 aa11.97□□□□□ -0.49
BEST3-210ENST00000551160 SMIM10L2BP0DMW5 78 aa11.97□□□□□ -0.49
BEST3-210ENST00000551160 DNAJB1P25685 340 aa11.97□□□□□ -0.49
BEST3-210ENST00000551160 HOXC8P31273 242 aa11.97□□□□□ -0.49
BEST3-210ENST00000551160 RRP1P56182 461 aaKnown RBP11.97□□□□□ -0.49
BEST3-210ENST00000551160 SIGLEC14Q08ET2 396 aa11.97□□□□□ -0.49
BEST3-210ENST00000551160 CBX2Q14781 532 aaPredicted RBP11.97□□□□□ -0.49
BEST3-210ENST00000551160 CDC37Q16543 378 aaPredicted RBP11.97□□□□□ -0.49
BEST3-210ENST00000551160 ASCL5Q7RTU5 278 aa11.97□□□□□ -0.49
BEST3-210ENST00000551160 TLR9Q9NR96 1032 aa11.97□□□□□ -0.49
BEST3-210ENST00000551160 USP15Q9Y4E8 981 aaPredicted RBP11.97□□□□□ -0.49
BEST3-210ENST00000551160 ABCB11O95342 1321 aa11.96□□□□□ -0.49
BEST3-210ENST00000551160 PPFIA4O75335 1185 aa11.96□□□□□ -0.49
BEST3-210ENST00000551160 GGPS1O95749 300 aa11.96□□□□□ -0.49
BEST3-210ENST00000551160 GLP2RO95838 553 aa11.96□□□□□ -0.49
BEST3-210ENST00000551160 NR3C2P08235 984 aa11.96□□□□□ -0.49
BEST3-210ENST00000551160 AVPR2P30518 371 aa11.96□□□□□ -0.49
BEST3-210ENST00000551160 CELF3Q5SZQ8 465 aaKnown RBP11.96□□□□□ -0.49
BEST3-210ENST00000551160 MYSM1Q5VVJ2 828 aa11.96□□□□□ -0.49
BEST3-210ENST00000551160 CLP1Q92989 425 aaKnown RBP11.96□□□□□ -0.49
BEST3-210ENST00000551160 RPGRIP1Q96KN7 1286 aa11.96□□□□□ -0.49
BEST3-210ENST00000551160 PXMP2Q9NR77 195 aa11.96□□□□□ -0.49
BEST3-210ENST00000551160 TCP11L1Q9NUJ3 509 aa11.96□□□□□ -0.49
BEST3-210ENST00000551160 BARX2Q9UMQ3 279 aaPredicted RBP11.96□□□□□ -0.49
BEST3-210ENST00000551160 PLAGL2Q9UPG8 496 aa11.96□□□□□ -0.49
BEST3-210ENST00000551160 RWDD3Q9Y3V2 267 aa11.96□□□□□ -0.49
BEST3-210ENST00000551160 GVINP1Q7Z2Y8 2422 aa11.95□□□□□ -0.5
BEST3-210ENST00000551160 FAM186AA6NE01 2351 aa11.95□□□□□ -0.5
BEST3-210ENST00000551160 CAND2O75155 1236 aa11.95□□□□□ -0.5
BEST3-210ENST00000551160 PDGFBP01127 241 aaPredicted RBP11.95□□□□□ -0.5
BEST3-210ENST00000551160 UBA1P22314 1058 aaKnown RBP11.95□□□□□ -0.5
BEST3-210ENST00000551160 SP2Q02086 613 aa11.95□□□□□ -0.5
BEST3-210ENST00000551160 COASYQ13057 564 aa11.95□□□□□ -0.5
BEST3-210ENST00000551160 EFHBQ8N7U6 833 aa11.95□□□□□ -0.5
BEST3-210ENST00000551160 IL31RAQ8NI17 732 aa11.95□□□□□ -0.5
BEST3-210ENST00000551160 PI4K2BQ8TCG2 481 aa11.95□□□□□ -0.5
BEST3-210ENST00000551160 OTUD7AQ8TE49 926 aaPredicted RBP11.95□□□□□ -0.5
BEST3-210ENST00000551160 APBB2Q92870 758 aa11.95□□□□□ -0.5
BEST3-210ENST00000551160 GPKOWQ92917 476 aaPredicted RBP eCLIP11.95□□□□□ -0.5
BEST3-210ENST00000551160 RNPEPQ9H4A4 650 aa11.95□□□□□ -0.5
BEST3-210ENST00000551160 PCDHGC5Q9Y5F6 944 aa11.95□□□□□ -0.5
BEST3-210ENST00000551160 PRR23AA6NEV1 266 aa11.94□□□□□ -0.5
BEST3-210ENST00000551160 KDM4AO75164 1064 aa11.94□□□□□ -0.5
BEST3-210ENST00000551160 LGALS2P05162 132 aa11.94□□□□□ -0.5
BEST3-210ENST00000551160 GHRP10912 638 aa11.94□□□□□ -0.5
BEST3-210ENST00000551160 MS4A1P11836 297 aa11.94□□□□□ -0.5
BEST3-210ENST00000551160 MYCLP12524 364 aaPredicted RBP11.94□□□□□ -0.5
BEST3-210ENST00000551160 NRIP1P48552 1158 aa11.94□□□□□ -0.5
BEST3-210ENST00000551160 RBM10P98175 930 aaKnown RBP11.94□□□□□ -0.5
BEST3-210ENST00000551160 BTG3Q14201 252 aaPredicted RBP11.94□□□□□ -0.5
BEST3-210ENST00000551160 QRICH1Q2TAL8 776 aa11.94□□□□□ -0.5
BEST3-210ENST00000551160 TRIM50Q86XT4 487 aa11.94□□□□□ -0.5
BEST3-210ENST00000551160 MCF2L2Q86YR7 1114 aa11.94□□□□□ -0.5
BEST3-210ENST00000551160 ZFP91Q96JP5 570 aaPredicted RBP11.94□□□□□ -0.5
BEST3-210ENST00000551160 PHF7Q9BWX1 381 aaPredicted RBP11.94□□□□□ -0.5
BEST3-210ENST00000551160 PLVAPQ9BX97 442 aa11.94□□□□□ -0.5
BEST3-210ENST00000551160 IRF2BPLQ9H1B7 796 aa11.94□□□□□ -0.5
BEST3-210ENST00000551160 BCAS3Q9H6U6 928 aa11.94□□□□□ -0.5
BEST3-210ENST00000551160 SETD4Q9NVD3 440 aa11.94□□□□□ -0.5
BEST3-210ENST00000551160 SUPT16HQ9Y5B9 1047 aaKnown RBP11.94□□□□□ -0.5
BEST3-210ENST00000551160 MRPL42Q9Y6G3 142 aaKnown RBP11.94□□□□□ -0.5
BEST3-210ENST00000551160 KMT2EQ8IZD2 1858 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 MYO15AQ9UKN7 3530 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 PROB1E7EW31 1015 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 H3BRB1 525 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 OPLAHO14841 1288 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 CFBP00751 764 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 CHRNA1P02708 482 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 ITGB1P05556 798 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 ICAM3P32942 547 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 HAND2P61296 217 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 FAM26DQ5JW98 314 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 GPATCH4Q5T3I0 446 aaKnown RBP11.93□□□□□ -0.5
BEST3-210ENST00000551160 RBM23Q86U06 439 aaKnown RBP11.93□□□□□ -0.5
BEST3-210ENST00000551160 ADGRF4Q8IZF3 695 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 MIER1Q8N108 512 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 SPPL3Q8TCT6 385 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 PPP2R3CQ969Q6 453 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 ZNF689Q96CS4 500 aaPredicted RBP11.93□□□□□ -0.5
BEST3-210ENST00000551160 PDCD2LQ9BRP1 358 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 MAF1Q9H063 256 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 TUT1Q9H6E5 874 aaKnown RBP11.93□□□□□ -0.5
BEST3-210ENST00000551160 ATG2AQ2TAZ0 1938 aa11.93□□□□□ -0.5
BEST3-210ENST00000551160 CCDC171Q6TFL3 1326 aa11.92□□□□□ -0.5
BEST3-210ENST00000551160 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
BEST3-210ENST00000551160 HSPD1P10809 573 aaKnown RBP11.92□□□□□ -0.5
BEST3-210ENST00000551160 HSD17B4P51659 736 aa11.92□□□□□ -0.5
BEST3-210ENST00000551160 ARHGAP4P98171 946 aa11.92□□□□□ -0.5
BEST3-210ENST00000551160 HNRNPUQ00839 825 aaKnown RBP eCLIP11.92□□□□□ -0.5
BEST3-210ENST00000551160 LPIN1Q14693 890 aa11.92□□□□□ -0.5
BEST3-210ENST00000551160 ALX1Q15699 326 aa11.92□□□□□ -0.5
BEST3-210ENST00000551160 PTPN21Q16825 1174 aa11.92□□□□□ -0.5
BEST3-210ENST00000551160 RUFY4Q6ZNE9 571 aa11.92□□□□□ -0.5
BEST3-210ENST00000551160 TBC1D10CQ8IV04 446 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms