RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 TMX1Q9H3N1 280 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 TBC1D7Q9P0N9 293 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 PPP2R3BQ9Y5P8 575 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 CASP14P31944 242 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 LRRC41Q15345 812 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 CENPPQ6IPU0 288 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 KIF18AQ8NI77 898 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 DUSP9Q99956 384 aaKnown RBP17.25■□□□□ 0.35
SCN8A-206ENST00000550891 SLC38A10Q9HBR0 1119 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 KCND1Q9NSA2 647 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 IGLV3-22A0A075B6J6 115 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 NFIBO00712 420 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 DGKZQ13574 1117 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 DNAJC19Q96DA6 116 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 WDR18Q9BV38 432 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 TEKT3Q9BXF9 490 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 TMOD4Q9NZQ9 345 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 TBCAO75347 108 aaKnown RBP17.24■□□□□ 0.35
SCN8A-206ENST00000550891 CYP11B2P19099 503 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 PBX1P40424 430 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 EPS15P42566 896 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 CACNB1Q02641 598 aaPredicted RBP17.24■□□□□ 0.35
SCN8A-206ENST00000550891 PRKG1Q13976 671 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 IRF2BP1Q8IU81 584 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 TPH2Q8IWU9 490 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 MYRIPQ8NFW9 859 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 ZFP91Q96JP5 570 aaPredicted RBP17.24■□□□□ 0.35
SCN8A-206ENST00000550891 EMILIN3Q9NT22 766 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 VAV3Q9UKW4 847 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 PITPNM2Q9BZ72 1349 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 MFAP3LO75121 409 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 PTPRAP18433 802 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 TBC1D8BQ0IIM8 1120 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 MB21D1Q8N884 522 aa17.24■□□□□ 0.35
SCN8A-206ENST00000550891 POLR3CQ9BUI4 534 aaPredicted RBP17.24■□□□□ 0.35
SCN8A-206ENST00000550891 GOLGA6L9A6NEM1 432 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 HSD17B4P51659 736 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 NSMFQ6X4W1 530 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 KCTD17Q8N5Z5 321 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 BHMT2Q9H2M3 363 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 SEMA6BQ9H3T3 888 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 TCEAL9Q9UHQ7 104 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 ZNF536O15090 1300 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 B4DLN1 442 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 TUBB4AP04350 444 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 HMGCS2P54868 508 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 C19orf81C9J6K1 198 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 IPO5O00410 1097 aaKnown RBP17.23■□□□□ 0.35
SCN8A-206ENST00000550891 NYAP1Q6ZVC0 841 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 SYT2Q8N9I0 419 aaPredicted RBP17.23■□□□□ 0.35
SCN8A-206ENST00000550891 TUFT1Q9NNX1 390 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 RGL1Q9NZL6 768 aa17.23■□□□□ 0.35
SCN8A-206ENST00000550891 NPHP3-ACAD11A0A0J9YXS1 232 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 TRAF5O00463 557 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 GYPCP04921 128 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 SPATA31C1P0DKV0 1188 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 TRIM21P19474 475 aaKnown RBP17.22■□□□□ 0.35
SCN8A-206ENST00000550891 SLC12A3P55017 1021 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 OTOP1Q7RTM1 612 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 SLC5A5Q92911 643 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 MXRA8Q9BRK3 442 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 MAP3K20Q9NYL2 800 aaKnown RBP17.22■□□□□ 0.35
SCN8A-206ENST00000550891 A0A1W2PQC6 194 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 KRT9P35527 623 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 CTTNQ14247 550 aaKnown RBP17.22■□□□□ 0.35
SCN8A-206ENST00000550891 TRERF1Q96PN7 1200 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 FHDC1Q9C0D6 1143 aaPredicted RBP17.22■□□□□ 0.35
SCN8A-206ENST00000550891 PKD2L1Q9P0L9 805 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 ZNF112Q9UJU3 913 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 FZD1Q9UP38 647 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 LUC7L2Q9Y383 392 aaKnown RBP17.22■□□□□ 0.35
SCN8A-206ENST00000550891 PSMD10O75832 226 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 PSMC6P62333 389 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 PPP2R5CQ13362 524 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 RNF207Q6ZRF8 634 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 NELFCDQ8IXH7 590 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 SAMD3Q8N6K7 520 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 PPP2R2CQ9Y2T4 447 aa17.22■□□□□ 0.35
SCN8A-206ENST00000550891 DDX39AO00148 427 aaKnown RBP17.21■□□□□ 0.35
SCN8A-206ENST00000550891 EML1O00423 815 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 EYA4O95677 639 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 FKBP3Q00688 224 aaKnown RBP17.21■□□□□ 0.35
SCN8A-206ENST00000550891 CCDC40Q4G0X9 1142 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 ATG4CQ96DT6 458 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 DYDC2Q96IM9 177 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 RNF181Q9P0P0 153 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 SAMM50Q9Y512 469 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 ATAD5Q96QE3 1844 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 SMCHD1A6NHR9 2005 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 VWA5AO00534 786 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 RIOK3O14730 519 aaKnown RBP17.21■□□□□ 0.35
SCN8A-206ENST00000550891 CCDC175P0C221 793 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 ARP10275 920 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 FXR1P51114 621 aaKnown RBP eCLIP17.21■□□□□ 0.35
SCN8A-206ENST00000550891 SULF1Q8IWU6 871 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 CLEC4DQ8WXI8 215 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 DCPSQ96C86 337 aaKnown RBP17.21■□□□□ 0.35
SCN8A-206ENST00000550891 NUP58Q9BVL2 599 aa17.21■□□□□ 0.35
SCN8A-206ENST00000550891 EIF2AK2P19525 551 aaKnown RBP17.2■□□□□ 0.34
SCN8A-206ENST00000550891 EHHADHQ08426 723 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms