RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 DUSP11O75319 330 aaKnown RBP13.72□□□□□ -0.21
ERBB3-216ENST00000550869 PGK1P00558 417 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 GCFC2P16383 781 aaKnown RBP13.72□□□□□ -0.21
ERBB3-216ENST00000550869 ATP2C1P98194 919 aaPredicted RBP13.72□□□□□ -0.21
ERBB3-216ENST00000550869 ZNF174Q15697 407 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 LENG9Q96B70 501 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 TRIM43Q96BQ3 446 aaPredicted RBP13.72□□□□□ -0.21
ERBB3-216ENST00000550869 FGD4Q96M96 766 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 MTMR9Q96QG7 549 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 PURBQ96QR8 312 aaKnown RBP13.72□□□□□ -0.21
ERBB3-216ENST00000550869 PDCD2LQ9BRP1 358 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 EHMT1Q9H9B1 1298 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 GDPD2Q9HCC8 539 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 PXMP2Q9NR77 195 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 LMBRD1Q9NUN5 540 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 CEP131Q9UPN4 1083 aa13.72□□□□□ -0.21
ERBB3-216ENST00000550869 ASTN1O14525 1302 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 SYNRGQ9UMZ2 1314 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 LOC102724159A0A0B4J2E5 919 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 DCDC2CA8MYV0 355 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 SPTLC2O15270 562 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 FIBPO43427 364 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 SNAI1O95863 264 aaPredicted RBP13.71□□□□□ -0.21
ERBB3-216ENST00000550869 RAG1P15918 1043 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 EDNRBP24530 442 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 CST5P28325 142 aaPredicted RBP13.71□□□□□ -0.21
ERBB3-216ENST00000550869 ACLYP53396 1101 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 PTGDRQ13258 359 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 PWP2Q15269 919 aaKnown RBP13.71□□□□□ -0.21
ERBB3-216ENST00000550869 NFKBIBQ15653 356 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 CSPP1Q1MSJ5 1256 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 LETM2Q2VYF4 491 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 Q4G0T1 1027 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 C9orf50Q5SZB4 431 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 AXDND1Q5T1B0 1012 aaPredicted RBP13.71□□□□□ -0.21
ERBB3-216ENST00000550869 PCNX4Q63HM2 1172 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 ARL6IP4Q66PJ3 421 aaKnown RBP13.71□□□□□ -0.21
ERBB3-216ENST00000550869 XRRA1Q6P2D8 792 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 SH3RF1Q7Z6J0 888 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 VSIG10LQ86VR7 867 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 ANKRD35Q8N283 1001 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 PCSK9Q8NBP7 692 aaKnown RBP13.71□□□□□ -0.21
ERBB3-216ENST00000550869 KLHDC9Q8NEP7 349 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 KCNG4Q8TDN1 519 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 NSUN6Q8TEA1 469 aaKnown RBP13.71□□□□□ -0.21
ERBB3-216ENST00000550869 SPATA32Q96LK8 384 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 RMDN3Q96TC7 470 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 TMEM60Q9H2L4 133 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 ABHD16BQ9H3Z7 469 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 SPC25Q9HBM1 224 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 STARD7Q9NQZ5 370 aa13.71□□□□□ -0.21
ERBB3-216ENST00000550869 IGLV3-22A0A075B6J6 115 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 SOWAHBA6NEL2 793 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 FAM86B1E9PN63 330 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 MEIS1O00470 390 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 LAD1O00515 517 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 CCNT1O60563 726 aaKnown RBP13.7□□□□□ -0.22
ERBB3-216ENST00000550869 PQBP1O60828 265 aaKnown RBP13.7□□□□□ -0.22
ERBB3-216ENST00000550869 TDP2O95551 362 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 FAM86B2P0C5J1 330 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 NCLP19338 710 aaKnown RBP13.7□□□□□ -0.22
ERBB3-216ENST00000550869 ATP2B1P20020 1258 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 MCM7P33993 719 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 PRPHP41219 470 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 MRPS9P82933 396 aaKnown RBP13.7□□□□□ -0.22
ERBB3-216ENST00000550869 CEBPZQ03701 1054 aaKnown RBP13.7□□□□□ -0.22
ERBB3-216ENST00000550869 ACVR2BQ13705 512 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 PGM5Q15124 567 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 STK38Q15208 465 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 NIPA1Q7RTP0 329 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 IL31RAQ8NI17 732 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 MORC4Q8TE76 937 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 IWS1Q96ST2 819 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 TMEM39AQ9NV64 488 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 FBXO2Q9UK22 296 aaPredicted RBP13.7□□□□□ -0.22
ERBB3-216ENST00000550869 ZHX1Q9UKY1 873 aaPredicted RBP13.7□□□□□ -0.22
ERBB3-216ENST00000550869 PCDHA7Q9UN72 937 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 UBIAD1Q9Y5Z9 338 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 MCM3APO60318 1980 aa13.7□□□□□ -0.22
ERBB3-216ENST00000550869 TBX3O15119 743 aa13.69□□□□□ -0.22
ERBB3-216ENST00000550869 SLC37A4O43826 429 aa13.69□□□□□ -0.22
ERBB3-216ENST00000550869 NR3C2P08235 984 aa13.69□□□□□ -0.22
ERBB3-216ENST00000550869 CNTN2Q02246 1040 aa13.69□□□□□ -0.22
ERBB3-216ENST00000550869 FPGSQ05932 587 aa13.69□□□□□ -0.22
ERBB3-216ENST00000550869 IL17AQ16552 155 aa13.69□□□□□ -0.22
ERBB3-216ENST00000550869 CEP55Q53EZ4 464 aa13.69□□□□□ -0.22
ERBB3-216ENST00000550869 ADALQ6DHV7 355 aa13.69□□□□□ -0.22
ERBB3-216ENST00000550869 CCSAPQ6IQ19 270 aaPredicted RBP13.69□□□□□ -0.22
ERBB3-216ENST00000550869 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.69□□□□□ -0.22
ERBB3-216ENST00000550869 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
ERBB3-216ENST00000550869 RNPC3Q96LT9 517 aaKnown RBP13.69□□□□□ -0.22
ERBB3-216ENST00000550869 GLT1D1Q96MS3 346 aa13.69□□□□□ -0.22
ERBB3-216ENST00000550869 UPF3AQ9H1J1 476 aaKnown RBP13.69□□□□□ -0.22
ERBB3-216ENST00000550869 SEMA6BQ9H3T3 888 aa13.69□□□□□ -0.22
ERBB3-216ENST00000550869 KCNMB3Q9NPA1 279 aa13.69□□□□□ -0.22
ERBB3-216ENST00000550869 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.69□□□□□ -0.22
ERBB3-216ENST00000550869 SRPRBQ9Y5M8 271 aaKnown RBP13.69□□□□□ -0.22
ERBB3-216ENST00000550869 A0A1W2PQ27 194 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 A0A1W2PQ64 194 aa13.68□□□□□ -0.22
ERBB3-216ENST00000550869 A0A1W2PQD8 194 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms